Gene Information

Name : B479_14565 (B479_14565)
Accession : YP_007229750.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3221163 - 3222656 bp
Length : 1494 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGCTTTCCGAACTGCCCATCCTGCCCGCCACCCGCGCCTTTCTCGAACGCAAGCTGAAGATGCGCATCGGCGCCGACTG
GCAGGACGCCGCCAGCGGTCGCACCCTGTCGTTCCGCAACCCGGCCACTGGCGAGGTACTGGGTGAAGTGCCCGCCGCCG
AGGCCGAAGATGTCGACCGCGCGGTGCGCGCCGCTCGCCAGGCCTTCGACGATTCGCCGTGGAGCCGCCTGCGCCCACGC
GAACGGCAGAACCTGCTGTGGCGCCTGGCCGACCTGATGGAGCGCGACGCCCGCCAGCTGGCCGAACTGGAATGCCTGAA
CAACGGCAAGAGCGCCGCCGTTGCCCAGGTGATGGACGTGCAACTGGCCATCGACTTCCTGCGCTACATGGCCGGCTGGG
CCACCAAGATCGAGGGTAGCACTGTCGAAGCCTCGATGCCGTTGATGCCCAACGACCAGTTCCATGGTTTCGTGCGGCGC
GAGGCAGTGGGCGTGGTCGGCGCCATCGTCGCCTGGAACTTCCCGTTGCTGCTGGCCTGCTGGAAGCTCGGCCCGGCCCT
GGCTACCGGTTGCACCGTCGTGCTCAAGCCCGCGGACGAAACACCGCTGAGCGTGCTCAAGCTGGCTGAGCTGGTGGACG
AAGCCGGCTACCCGGCAGGTGTGTTCAACGTGGTCACCGGCACCGGCCTGAACGCCGGCGCCGCACTCAGCCGCCACCCC
GGCGTGGACAAGCTGACCTTCACTGGCTCCACCGAGGTCGGCAAGCTGATCGGCAAGGCAGCCATGGACAACATGACCCG
TGTCACCCTGGAACTCGGCGGCAAGTCGCCGACCATCGTCATGCCCGACGCCAACCTGCAGGAAGCCGCGGCCGGCGCGG
CCACGGCGATCTTCTTCAACCAGGGCCAGGTGTGCTGTGCCGGGTCCCGCCTGTACGTGCACCGCAAGCACTTCGACAAC
GTGGTGGCCGACATCGCCGGCATCGCCAACGGCATGAAGCTGGGCAGCGGTCTGGACCCGGCAGTGCAGATGGGTCCGCT
GATCTCGGCCAAGCAGCAGGACCGCGTCACCGGCTACATCGAGCTTGGCCGCGAGCTGGGCGCGACCATTGCCTGCGGTG
GCGAAGGCTTCGGGCCGGGCTATTTCGTAAAGCCGACAGTGATCGTCGATGTCGACCAGCGCCACCGCCTGGTGCAGGAA
GAAATCTTCGGCCCGGTGCTGGTGGCGATGCCGTTCGATGACATCGACGAAGTGATCGGCATGGCCAACGACAACCCCTA
TGGCCTGGGTGCGAGCATCTGGTCCAACGACCTGGCCGCCGTGCACCGGATGATCCCACGCATCAAGTCGGGGTCGGTGT
GGGTCAACTGCCACAGCGCCCTCGACCCTGCCTTGCCCTTTGGCGGCTACAAGATGTCCGGCGTCGGCCGTGAGATGGGG
GCGGCTGCCATCGACCACTACACCGAGCTGAAATCGGTGTTGATCAAGCTCTGA

Protein sequence :
MLSELPILPATRAFLERKLKMRIGADWQDAASGRTLSFRNPATGEVLGEVPAAEAEDVDRAVRAARQAFDDSPWSRLRPR
ERQNLLWRLADLMERDARQLAELECLNNGKSAAVAQVMDVQLAIDFLRYMAGWATKIEGSTVEASMPLMPNDQFHGFVRR
EAVGVVGAIVAWNFPLLLACWKLGPALATGCTVVLKPADETPLSVLKLAELVDEAGYPAGVFNVVTGTGLNAGAALSRHP
GVDKLTFTGSTEVGKLIGKAAMDNMTRVTLELGGKSPTIVMPDANLQEAAAGAATAIFFNQGQVCCAGSRLYVHRKHFDN
VVADIAGIANGMKLGSGLDPAVQMGPLISAKQQDRVTGYIELGRELGATIACGGEGFGPGYFVKPTVIVDVDQRHRLVQE
EIFGPVLVAMPFDDIDEVIGMANDNPYGLGASIWSNDLAAVHRMIPRIKSGSVWVNCHSALDPALPFGGYKMSGVGREMG
AAAIDHYTELKSVLIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-76 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-71 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-76 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_14565 YP_007229750.1 aldehyde dehydrogenase VFG0082 Protein 1e-76 44