Gene Information

Name : B479_13925 (B479_13925)
Accession : YP_007229624.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : Fis family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3052651 - 3054603 bp
Length : 1953 bp
Strand : +
Note : COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

DNA sequence :
ATGGATGCTCTTGCCTCCCAGGTCGTCGTGTTGATCAGCCACTTGCAGCGCCCCCAACAACGGAGCCGGCTCGCCCATGT
GGTGGCCGGGCTCACGACGGACTACCCCGATACCCGTATCGAAGTCCTCGACACCTCGGTGGCTGAAGCACTGCAGACCG
CCCTAGAATTGGAGCAGGCAGGTAAGGTCGATGTGTTCGTCTGCGCCGGGGCGACCGCCGCCTACCTGCGCAAACACCTG
ACACGCCCGGTACTGGCGATGCGCGTGGGCAGCGGCGATCTGCTACGGGCATTGGGGCAGGCCCGCGAACGCTCCTCCCA
AGTGGCCGTGCTCAGCTACAACCACATCAACCACGACCTGCAAGCCATGGCCGCGCTCTTCACCGTCCAGGTTCACCAGG
CCGCCTACACCTCCCTGGAAGAGGCCCGCCAGGCCGTCGAACAGGCGGCCCAGCTAGGCTGTCGCAGCATCATCGGCTCG
TCGACGGTGGTGGGGCTGGCGGAGCAGGCAGGGCTGCATGGCGTGCTGTCGCTGAGCGAAGAAACCGCGCGCAAAGCGCT
GGAGGAAGCCCTGGGCATTCTCGACACTCAGCGCGTCGAGATCGCCAAACGGCGGCATCTGAATGCCGTGCTGCGGCATA
TCCCCGCCGGCGTTGCAGCGGTCGACAACCAAGGCGTGGTGCAGTCGCTCAACCCGGCCCTTGCGCAGCTGCTGGACCTG
CCGGTTAGCGCAGCGTTGGGCCGGCCGCTGCAGCAGCTGTGCCCGGAACTGGACATGCAGCAGGCGCTGCAGGAAGGCAC
GGGTGAAGAAAACCGTGTGATGCGGCTCGGCTCGCACGTCGTGGTGAGCAATTTACTGCCTATCCTGGAGAACGGCGAAC
GTACCGGCCTGGTCCTGACCTGCCAGGACATCACTGTTGTGCAACGTGCCGACCAGCGCATCCGATCCACCCGCCGCCCC
GGTGCGTTCACTGCCCGTTACCGGCTCGACCAGCTCAACGGCAACAGCAAGGCCAACCGCGAGATGCTGCAGTTGGCCAA
GCGTTTTGCCACCAGCCATTCGACCATCCTGATTACCGGTGAAAGCGGCACCGGCAAGGAACTGCTCGCCCAGGGAATCC
ATAACGAAAGCCCACGCCGGCAGGGCCCCTTTGTCGCCATCAATTGCGCGGCGTTTCCCGAGTCGTTGTTGGAAAGTGAA
TTGTTCGGCTACGAGGAAGGCGCCTTCAGCGGCTCGCGCAAAGGTGGCAAGCCAGGCCTGTTCGAAGCGGCACACCGCGG
CACGCTGTTCCTCGACGAGATCGGCGACATGCCGGTTTCGCTGCAAACACGCCTTCTGCGCGTGCTGCAAGAGCGCGAAG
TCCTGCGCCTGGGCAGCACCGAACCGATTGCCATCGACGTGCGCATCATTGCCGCCACCCACCAGGACCTGCGCAGCGCC
ATGGACGATGGCGATTTCCGTACCGACCTGTATTTCCGGCTCAACATCCTGCGTCTGCAGACCACCCCGCTGCGAGAGCG
CCCTGAGGACATTGCCCTGATCTGCCGGGTCATTAGCCAGCGCCTGCTTGTTCAGGGGCAACCACCGGGAGCTGCAGACA
TCCCCGCCGCGCTGCTGCCGTACCTTGAACGCTATGCCTGGCCGGGCAATGTCCGGGAACTGGAGAATGTGATCGAGCGC
GCGATGCTCTCGGCACGCGAACTGCTTGAGGAACACCGCTTGAAAGAGCAGTACCTGGCACGCGTGCTACCTGAACTGTG
CGAAGGCCCTCCCCGTTCACCCGCCCGGAAAAAGTCGCCAGGCGAAACGGACCTGCACACCATCGGCAAGATCGCGCAAC
TGCGCCATGTAAAGGAAACGCTGGAAAGCTGCCACGGCAACCTCGACGAAGCCGCCCGCCGTCTCGGCATCAGCCGCACA
ACCTTGTGGCGGCGCTTGCGATCTGCCAATTGA

Protein sequence :
MDALASQVVVLISHLQRPQQRSRLAHVVAGLTTDYPDTRIEVLDTSVAEALQTALELEQAGKVDVFVCAGATAAYLRKHL
TRPVLAMRVGSGDLLRALGQARERSSQVAVLSYNHINHDLQAMAALFTVQVHQAAYTSLEEARQAVEQAAQLGCRSIIGS
STVVGLAEQAGLHGVLSLSEETARKALEEALGILDTQRVEIAKRRHLNAVLRHIPAGVAAVDNQGVVQSLNPALAQLLDL
PVSAALGRPLQQLCPELDMQQALQEGTGEENRVMRLGSHVVVSNLLPILENGERTGLVLTCQDITVVQRADQRIRSTRRP
GAFTARYRLDQLNGNSKANREMLQLAKRFATSHSTILITGESGTGKELLAQGIHNESPRRQGPFVAINCAAFPESLLESE
LFGYEEGAFSGSRKGGKPGLFEAAHRGTLFLDEIGDMPVSLQTRLLRVLQEREVLRLGSTEPIAIDVRIIAATHQDLRSA
MDDGDFRTDLYFRLNILRLQTTPLRERPEDIALICRVISQRLLVQGQPPGAADIPAALLPYLERYAWPGNVRELENVIER
AMLSARELLEEHRLKEQYLARVLPELCEGPPRSPARKKSPGETDLHTIGKIAQLRHVKETLESCHGNLDEAARRLGISRT
TLWRRLRSAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01495.1 propionate catabolism operon regulator prpR Not tested PAGI-1 Protein 0.0 85