Gene Information

Name : B479_01305 (B479_01305)
Accession : YP_007227122.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 317728 - 318471 bp
Length : 744 bp
Strand : +
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGGCCGTGAGCGCCTTAGCCGGCTGCTCGGCGAACTGGAGGGTTACAC
CGTGCTGGAGCCTAGCGCCACCAACGGCGAGGAGGCCTTGGCGCTGATCGAAAGCCTTAAGCCCGATGTGGTCCTGCTGG
ACATCGGCATGCCAGGCCTGGATGGCCTGCAGGTTGCTGCTCGCTTGTGCGAGCGCGAGGCGCCTCCGGCGGTGGTGTTT
TGCACCGGGGACGATGAATACGGTGCCGAGGCTTTCAAGGACAGTACCCTCAGCCATGTGACCAAACCTTTCCAGGCCCA
GGCCTTGCGCGATGCCCTGCGCAAGGCCGAAAAGCCCAACCGCGCCCAGTTGGCGGCGCTCACCAGGCCGGCCAACGAAG
GCGGCGGCCCGCGTAGCCACATCAGTGCCCGCACGCGCAAAGGCATCGAGCTGATCCCTTTGCCCCAGGTCATCTATTTC
ATTGCCGACCACAAGTACGTGACCTTGCGCCACGAGGCCGGGGAAGTGTTGCTCGACGAGCCGCTCAAGGCCCTGGAAGA
CGAGTTTGGCGAACGCTTCGTGCGTATCCACCGCAATGCCCTGGTCGCCCGTGAGCGTATCGAACGCCTGCAGCGCACGC
CGCTGGGGCATTTCCAGCTATACCTGAAAGGCCTGGACGGTGACGCCCTGACCGTCAGCCGGCGCCATGTGGCCGGTGTG
CGCAAGATGATGCAAACCCTCTGA

Protein sequence :
MNVLIVDDEPQGRERLSRLLGELEGYTVLEPSATNGEEALALIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPAVVF
CTGDDEYGAEAFKDSTLSHVTKPFQAQALRDALRKAEKPNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLPQVIYF
IADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 9e-43 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 9e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_01305 YP_007227122.1 LytTR family two component transcriptional regulator VFG0119 Protein 6e-89 80