Gene Information

Name : B479_11550 (B479_11550)
Accession : YP_007229151.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2542739 - 2544259 bp
Length : 1521 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATCTACGCACAACCCGGAACCCCAGGCGCCATCGTGTCCTTCAAGCCACGCTACGGCAATTTCATCAACGGCGAATT
CGTGCCGCCGCTGGGCGGCCAGTACTTCACCAACAGCTCGCCGGTCAATGGCCAGCCGATTGCCGAGTTCCCGCGCTCCG
GCGCCCAGGACATCGAGCAGGCCCTGGACGCCGCGCATGCCGCTGCCGAGGCCTGGGGCAAGACCTCGGTGCAGGACCGC
GCCCTGGTACTGCTGAAGATCGCCGACCGCATCGAACAGAATCTCGAAGTACTGGCCGTTACCGAGAGCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTCAACGCCGACGTGCCGCTGGCGGCGGACCACTTCCGCTACTTCGCCGGCTGCATCCGTG
CCCAGGAAGGCGGCGCCGCCGAAATCAACGAGGGCACCGTGGCCTACCACATCCACGAGCCATTGGGCGTGGTCGGGCAG
ATCATTCCATGGAACTTCCCGCTGCTGATGGCCGCCTGGAAACTCGCCCCGGCGCTGGCAGCCGGCAACTGCGTGGTGCT
CAAACCGGCGGAGCAGACGCCGTTGTCGATCACCATTTTCGCCGAGCTGATCGCCGACCTGCTGCCAGCAGGCGTGCTGA
ACATCGTCCAGGGCTTTGGCCGCGAAGCCGGTGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCCACCCCGGTGGGCTCGCACATCATGAAGTGCGCGGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCCGCGTTCATCGAAAAGGCAGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGTGAAGTGTGCACCTGCCCGTCGCGGGCGCTGATCCAGGAATCGATCTACGAGCCGTTCATGGCCGAG
GTGATGAAGAAGATCGCCAAGATCACCCGTGGCAACCCGCTAGACACCGCGACCATGGTCGGCGCCCAGGCCTCGGAGCA
GCAATACGACAAGATTCTTTCCTACTTGCAGATTGCCCGGGAGGAGGGCGCGCAGCTGCTCACCGGTGGCGCTGCCGAGC
GGCTCGACGGCGACCTGGCCAGCGGTTACTACATCCAGCCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAGGAGATCTTCGGCCCGGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCCCTGGCGATCGCCAACGACAGCGA
GTTTGGCCTGGGCGCGGGGCTGTGGACCCGTGACATCAACCGTGCCTACCGCATGGGCCGCGGGATCAAGGCCGGGCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTCGGTGGCTACAAGAAGTCCGGGGTGGGCCGCGAGACG
CACAAGATGATGCTCGATCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGTTGGGCTTCTTCTA
A

Protein sequence :
MIYAQPGTPGAIVSFKPRYGNFINGEFVPPLGGQYFTNSSPVNGQPIAEFPRSGAQDIEQALDAAHAAAEAWGKTSVQDR
ALVLLKIADRIEQNLEVLAVTESWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITIFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYEPFMAE
VMKKIAKITRGNPLDTATMVGAQASEQQYDKILSYLQIAREEGAQLLTGGAAERLDGDLASGYYIQPTLLKGNNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDSEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-149 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-156 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-156 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-156 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-155 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_11550 YP_007229151.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 66