Gene Information

Name : B479_11220 (B479_11220)
Accession : YP_007229085.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2470353 - 2471372 bp
Length : 1020 bp
Strand : -
Note : COG3842 ABC-type spermidine/putrescine transport systems, ATPase components

DNA sequence : 
ATGACCTTTCTGTTGATCGACAAGCTTTGCAAGCGCTATGGCGCCACGGAGGCAGTGGCCAGCTCGTCACTGGCCATCGA
GAAAGGCGAGTTCGTCTCCCTGCTTGGCCCTTCGGGCTGCGGCAAGACCACCACCCTGCAAATGATTGCCGGCTTCGTCG
AGGTCACCAGCGGCCGCATTGTCCTCGACGGCCGCGACATCACCCACGCCAAGCCGGCCAGCCGAGGCCTGGGCGTGGTA
TTCCAGAGCTACGCGCTGTTCCCGCACATGACCGTGCGCGACAACGTCGCCTTCGGCCTGCGCATGCGCAAGGTGGCCAA
CGCCGACATAGCCCGCCGGGTCGACCAGGCCCTGGCGCTGGTGCGCCTGGACAAACATGCCGAGCGCTACCCGCGCGAAC
TCTCCGGCGGCCAGCGTCAACGGGTGGCCCTGGCCCGTGCACTGGTGATCGAACCGCCGGTGCTGCTGCTGGACGAACCA
CTGTCCAACCTGGACGCCCATCTGCGTGAAGAAATGCAGTTCGAGATCTGCCGTATCCAGAACGAGGTCGGCATTACCAC
TTTGATGGTCACCCACGACCAGGCCGAGGCGCTGTCGATCAGCGACCGGGTGGTGGTGATGGAAGCCGGGCGCATTACCC
AGGTCGATGCCCCCTACCGCCTGTATGAACACCCGGGCACGCCTTTCATTTCCGACTTTGTCGGCAAGGCCAACCGCCTG
CACGGCGTAACCGGCCCCGACGGGCAACCGCGGGCGGATGCCCAGGGCCCGCTGACCCTCAGCCTGCGCCCGGAAAAGAT
CAGCCTCGGCCCGGCCGGCAGCGGCAAGCTCGCAGGCCGCATCAGCTGCCGTTACTTCCTCGGCAGCCAATGGCTGTATC
GGGTCGACACCGCCCTGGGCAACCTGGCCGTGGTGCGTGCCAACGACGGCAACACCCCGCTGGATGAAGGCACACAGGTC
GGCCTGGACTGGAACGATGCCCTGCTGCGGGTGCTGAACGCTGGCGAGGTGGCGGCATGA

Protein sequence : 
MTFLLIDKLCKRYGATEAVASSSLAIEKGEFVSLLGPSGCGKTTTLQMIAGFVEVTSGRIVLDGRDITHAKPASRGLGVV
FQSYALFPHMTVRDNVAFGLRMRKVANADIARRVDQALALVRLDKHAERYPRELSGGQRQRVALARALVIEPPVLLLDEP
LSNLDAHLREEMQFEICRIQNEVGITTLMVTHDQAEALSISDRVVVMEAGRITQVDAPYRLYEHPGTPFISDFVGKANRL
HGVTGPDGQPRADAQGPLTLSLRPEKISLGPAGSGKLAGRISCRYFLGSQWLYRVDTALGNLAVVRANDGNTPLDEGTQV
GLDWNDALLRVLNAGEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-40 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_11220 YP_007229085.1 ABC transporter ATP-binding protein BAC0604 Protein 8e-41 41