Gene Information

Name : B479_10495 (B479_10495)
Accession : YP_007228944.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : transcriptional regulator-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2292695 - 2293567 bp
Length : 873 bp
Strand : -
Note : COG2378 Predicted transcriptional regulator

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAGCAGGTACGCTGGGACCTGGCACTTCGCTATCGTTTGATCGAGACCGTTGCCTGGTG
GGAAGGCCGGCTGACCACGGGGCACCTGATGCAGAGCTTTGGCATCAGCCGCCAGCAGGCGTCTAAAGACATCAACACCT
ACATCAGCGAGCATGCGTCCAGAAACTTGACATATGACAAGCGGATCAAAGGCTACGTACCTACGCCGCACTTCAAACCA
CGCTTCATCGACCTCAGCGCCAGCGCCTACCTCGATATGCTTGCCCAGAACAATGAACGAGCCCCGCATATCGAAGGGCT
GAAGCTCGCCTATGCGCATACATTGATGTTGCAAGTTCCCGATCGCAGCATTCAGCCTGAGGTGCTTCGCCCCCTTTTAC
GGGCTTGCCGGGAAGGGTTGCGACTAGAGGTCGAATACGTTTCGCTGGCCAATCCCGAGCCTGAGATTCGCTTGATCGAA
CCGCACACACTGATTCATACCGGCATGCGCTGGCACGTTCGGGCCTACTGCGAGAAAAACAGCGCTTACCGCGACTTCGT
GCTCAGCCGCATGCGCGGCAAGCCAGACCTACTGGACGGCAATGGCAACGGCATAGAAGGCGATACAATCTGGAACACTG
ATGTATCGGTGATCCTGGAACCTGACCCGCGGCTCGACGCCGCGCAGAAGGCGATCATAGAGGGTGACTACGGTATGCTG
AATGGCCGGCTGGAGATCCCGAGCCGGCAAGCGTTGGTCAAATATGTGCTGCAACGCTATCAAATCGACCCCAAGAACTT
GGACCCTAAGCCAGAAGCGCAGCAGGTCGTGATCGCCAACTTGAACGCGCTGAAACCTTGGCTCTACGACTGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLMQSFGISRQQASKDINTYISEHASRNLTYDKRIKGYVPTPHFKP
RFIDLSASAYLDMLAQNNERAPHIEGLKLAYAHTLMLQVPDRSIQPEVLRPLLRACREGLRLEVEYVSLANPEPEIRLIE
PHTLIHTGMRWHVRAYCEKNSAYRDFVLSRMRGKPDLLDGNGNGIEGDTIWNTDVSVILEPDPRLDAAQKAIIEGDYGML
NGRLEIPSRQALVKYVLQRYQIDPKNLDPKPEAQQVVIANLNALKPWLYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 5e-69 49
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 5e-69 49
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 3e-68 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_10495 YP_007228944.1 transcriptional regulator-like protein VFG1105 Protein 2e-69 49