Gene Information

Name : B479_09910 (B479_09910)
Accession : YP_007228827.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2203714 - 2204730 bp
Length : 1017 bp
Strand : -
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGATGCGCCTGCTACCCTGCATCGCCGTTGCCCTGGCCGCCCTGTTGGCGGCCCTGCTGGCCGGCACCGCCATCGGCGA
AACCAACCTGTCGCCCGGCGTGGTCGGCCAGGTACTGGCCAACCACCTGTGGCAGGCCGGCTACCCGGTCGACCCGATCG
ACGCCGGCATCGTCTGGAACTACCGCCTGCCCCGCACCCTGGTTGCCGCGGCCTGCGGCGCCGGCCTGGCCACCTGCGGC
GTGATCCTCCAGGCACTGTTGCGCAACCCGTTGGCCGAGCCTTACCTGCTGGGCCTGTCTGCCGGCGCCTCGACCGGTGC
GGTGCTGGTGGGCCTGCTGGGCTTCGGCAGCCTGGCGTTGAGCATGTCCGGCGGCGCGTTCATCGGTGCCCTGGCAGCGT
TCGCTTTGGTACTGTTGCTGGCCCGGGCAGCCGGCCCCAGCAGCAACAATGCCCAGGTGATCCTTGCCGGGATCGCCGGC
TCGCAACTGTTCAACGCCCTTACCGCCTTCCTCATCACCATGTCGGCCACCGCCGAGCAGGCGCGCGGCATCCTGTTCTG
GCTGCTGGGCAACCTCAGTGGCGTACGTTGGCCTTCGGTGTGGCTGGCCGTGCCAGTTGTACTGTTCGGGCTGTTGGTGT
GCCTGTGGCATCGCCGTGCCTTGGATGCCTTCACCTTCGGTGCCGACTCGGCGGCGTCGCTGGGCATCCCGGTGTGGCGT
ACCCAGTTGCTGCTGATCAGCTGCGCGGCGCTGGTGACCGCGGTGATGGTGTCCATCGTCGGCGCCATCGGTTTTGTCGG
GCTGGTGATCCCCCATGCCCTGCGCCTGCTGCTCGGCCCCGGGCACAGCCGCCTGCTGCCCGCCAGCGCACTGGGCGGGG
CACTGTTCCTGATTGCCGCCGACATCCTGTCGCGCATCTTGATCCCTGGCCAGGTGATCCCCGTGGGCGTAGTCACAGCG
CTGCTCGGCGCACCGGTCTTCGCGCTGATCCTGGTCAGCCGCCGGGGGCGCCCATGA

Protein sequence :
MMRLLPCIAVALAALLAALLAGTAIGETNLSPGVVGQVLANHLWQAGYPVDPIDAGIVWNYRLPRTLVAAACGAGLATCG
VILQALLRNPLAEPYLLGLSAGASTGAVLVGLLGFGSLALSMSGGAFIGALAAFALVLLLARAAGPSSNNAQVILAGIAG
SQLFNALTAFLITMSATAEQARGILFWLLGNLSGVRWPSVWLAVPVVLFGLLVCLWHRRALDAFTFGADSAASLGIPVWR
TQLLLISCAALVTAVMVSIVGAIGFVGLVIPHALRLLLGPGHSRLLPASALGGALFLIAADILSRILIPGQVIPVGVVTA
LLGAPVFALILVSRRGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1769 YP_005134303.1 ferrichrome transport system permease protein fhuB Virulence Not named Protein 1e-26 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 3e-30 41
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-30 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-30 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 2e-30 41