Gene Information

Name : B479_09405 (B479_09405)
Accession : YP_007228728.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2092844 - 2093527 bp
Length : 684 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGGGCCCCAGCATTCTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTGACCATCCTGCACGC
CCTGTCCCTCGACCTGGCCCAAGGCGACAGCCTGGCAATCGTCGGCGCCTCGGGTTCGGGCAAGTCGACCCTGCTCGGCC
TGCTCGCCGGCCTCGACCAGCCCAGTGCCGGCAAGGTCATCCTTGCTGGCCACGACCTGGGGCCGCTGGATGAAGACCAG
CGCGCGCGGGTGCGCGCCGAACATGTGGGTTTCGTGTTCCAGTCGTTCCAGTTGCTCGACAGCCTCAATGCCCTGGAGAA
CGTCATGCTGCCGCTGGAACTGGATGGCCGCCGCGATGCCCGCGAACACGCGCGCACCCTGCTCGAACGGGTCGGTCTGG
GCAAGCGCCTGAGCCACACTCCGCGCCAGCTTTCGGGCGGCGAACAACAACGGGTGGCCATCGCCCGCGCCTTCGCCGCG
CAACCGGCAGTGCTGTTTGCCGACGAACCCACCGGCAACCTCGACAGCCACACCGGCGAACGCATCAGCGACTTGCTGTT
CGAACTGAACAAGGAGCGCGGCACCACCCTGGTGCTGGTTACCCATGACGAACGCCTGGCCCGGCGCTGCCGCCGCCAGA
TTCGCCTGGATGCGGGCCGCCTGGTGGCCCCGGCGGAGGCCTGA

Protein sequence : 
MGPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDQPSAGKVILAGHDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREHARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-22 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_09405 YP_007228728.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-29 50
B479_09405 YP_007228728.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 45