Gene Information

Name : B479_00890 (B479_00890)
Accession : YP_007227039.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : NLPA lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 191478 - 192248 bp
Length : 771 bp
Strand : -
Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen

DNA sequence :
ATGAAGAAGCTGCTTGCTGTTGTCGCCGCTGTCGCGGCCTTCTCGGCCCACGCCGAGTCCCTGACCGTTGCCGCTACCCC
GGTTCCGCACGCCGAGATCCTCAACTTCGTCAAACCTGTTCTGGCGAAAGAGGGCGTGGAGCTGAAGGTCAAGGAATTCA
CCGACTACATCCAGCCGAACGTGCAGGTGGCGGAAAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCTGGAT
GAGTTCAACAAGGCCAAGGGTACCAACCTGGTGAGCGTTGCCGGCGTGCACATCGAGCCGCTGGGCGTGTACTCGACCAA
GATCAAGAAGCTGGACGAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCGCTGC
TGCTGCTGGACAAGGCCGGCGTGATCAAGCTGAAGGACAACAAGAACATCCTGTCCACCGTGAAGGATGTTGCCGAGAAC
CCGAAAAGCCTGAAGTTCCGTGAGCTGGAAGCAGCCACCATCCCGCGCGTGCTGACCCAGGTCGATGCTGCCCTGATCAA
CACCAACTACGCGCTGGAAGCCAAGCTGAACCCGGAGAAAGACGCTCTGGTCATCGAAGGCAGCGACTCGCCTTACGTGA
ACATCCTGGTTGCCCGCCCGGACAACAAGGACTCGGACGCCATGAAAAAGCTGGCTGCTGCGCTGCACTCGCCTGAGGTG
AAGCAGTTCATCAACGAGAAGTACAAAGGCGCTGTGGTTCCGGCGTTCTGA

Protein sequence :
MKKLLAVVAAVAAFSAHAESLTVAATPVPHAEILNFVKPVLAKEGVELKVKEFTDYIQPNVQVAEKRLDANFFQHQPYLD
EFNKAKGTNLVSVAGVHIEPLGVYSTKIKKLDELSSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKNILSTVKDVAEN
PKSLKFRELEAATIPRVLTQVDAALINTNYALEAKLNPEKDALVIEGSDSPYVNILVARPDNKDSDAMKKLAAALHSPEV
KQFINEKYKGAVVPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 2e-39 44
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 6e-43 43