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Name : B479_08175 (B479_08175) Accession : YP_007228492.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : - COG ID : - EC number : - Position : 1831158 - 1832723 bp Length : 1566 bp Strand : - Note : COG2202 FOG: PAS/PAC domain DNA sequence : ATGCGTAACAACCAGCCGATTACCCAGAGAGAACGGACTTTCCCTGCCCAGCAGCGGTTGATCTCCACCACCAATGCCAA AGGTGTGATCACTTACTGCAACGATGCCTTCATCGAGATCAGTGGTTTCACCCGCGAAGAACTGACCGGTGCGCCGCACA ACCTGGTGCGCCACCCCGACGTACCGCCAGCGGTGTTTGCCCACATGTGGCAAACCCTCAAGCAGGGCCAGCCGTGGATG GGTATCGTCAAGAACCGCTGCAAGTCCGGCGACCACTACTGGGTCAACGCCTATGTCACGCCGATCTTCGACAACAACCA GGTAGTCGGCTTCGAGTCGGTGCGGGTCAAGCCTACCGCCGAGCAGGTCCGCCGCGCCGAGGCGCTGTACCAGCGCATCA ACCAGGGCAAGCCGCCGGTACCACGCCGGGACAAGTGGCTGCCGGTGCTGCAGGACTGGTTGCCGTTCATCCTGATCAGC CAGGTGGGCTTCCTGATCGGCAACTGGCTGGGCCATTCCTGGGGCTTCGCCCTGGCTGCCGGGCTTTCCGTACCGCTGGG CCTGCTGGGCCTGAGCTGGCAGCAACGTGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAAACCACCTCCGACCCGCTGA TCGCGCAGATGTACACCGACAGCCGGGGCGTGCAGGCGCGCCTGGAAATGGCCATGCTCAGCCAGGACGCGCGCATGAAA ACCTGCCTGACCCGCCTGCAGGACAGCGCCGAACACCTCAGCGAACAGGCGCGCCAGTCTGACGCGCTTGCGCACAAGAG CTCTTCGGGCCTGGAGCGCCAGCGAGTGGAGACCGAGCAGGTTGCCGCTGCGGTCAACCAGATGGCCGCCACCACCCAGG AAGTGGCCAACCACGTGCAGCGCACCGCCGATGCCACCCAGGAAGCCAACCGCCTGACCAGCCAGGGCCGTCAGATTGCC GGTGAAACCCGCGAGGCCATCGAGCGCCTGTCGGCGGCGGTGGGCGAAACCGGCCAGACGGTGACGCAACTGGCCAAGGA CAGCGACGAGATTGGTGGCGTGGTCGATGTGATCAAGGGCATCGCCGACCAGACTAACCTGCTGGCGCTGAACGCGGCGA TCGAAGCGGCACGTGCCGGTGAAATGGGCCGAGGCTTTGCCGTGGTGGCCGACGAAGTGCGCCAGCTGGCCCAGCGCACT GCCGAATCCACCGGGCAGATCCACGGCCTGATCGCCAAGCTGCAACAAACCGCCAGCAATGCCGTACTGACCATGGAAAC CGGCCATCGCCAGGCGCAGGAAGGCGTCGACCGTGTGATGCAGGCCGACGAGGCGCTGGTGGGTATCAGTGAAGCGGTGG CCAACATCACCGACATGGCCACCCAGATTGCTGCAGCGACCGAAGAGCAGACTGCAGTGGCTGACGAGATCAGCCGCAAC ATCAGCACCATCGCCGACCTGGCCGACCAGACTGCCGAACAGGCCCAGCACTCGGCGCTGCTCAGCGAAGAGCTGACCAG TACGGCGGGTACCCAGTACTCGCTGGTGGAGCGGTTCAACCGCTAG Protein sequence : MRNNQPITQRERTFPAQQRLISTTNAKGVITYCNDAFIEISGFTREELTGAPHNLVRHPDVPPAVFAHMWQTLKQGQPWM GIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAEQVRRAEALYQRINQGKPPVPRRDKWLPVLQDWLPFILIS QVGFLIGNWLGHSWGFALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMAMLSQDARMK TCLTRLQDSAEHLSEQARQSDALAHKSSSGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIA GETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRN ISTIADLADQTAEQAQHSALLSEELTSTAGTQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 5e-68 | 41 |
