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Name : lysS (B479_05790) Accession : YP_007228017.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1303971 - 1305473 bp Length : 1503 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGACCTCAAGACCGAAGCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC CGCCGAGCGCGCCAAGGGCAATGCCTTCCCCAATGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGAAGCAGTATG CGGACAAGACCAAGGAAGAACTGGAAGCTGCAGCGATTCCGGTCAAGGTTGCCGGCCGCATCATGCTCAACCGCGGCTCG TTCATGGTCATTCAGGACATGACCGGCCGTATCCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAGACCCTGGCTGC GGTCAAGACCTGGGACCTGGGCGACATCATCAGCGCCGAAGGTACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AAATGACCAACGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCCGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTACCGCCAGCGTTACGTCGACCTGATGGTCAATGAAGAAACCCGTCACACCTTCCGTGTGCGTTCGCAGGTGATCTC GCACATCCGCAAGTTCCTCATCGAGCGCGACTTCCTCGAAGTCGAGACGCCGATGCTGCAAACCATCCCGGGCGGTGCCG CGGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGCCATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGCCTGGTGGTTGGTGGCTTCGAGAAGGTATTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACTCGTCACAA CCCTGAATTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACCGCGACAACATGGACCTCACCGAGGAACTGTTCC GCGAGCTGGCGCAGCTGGTACTGGGCACTACCGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGCGAGCCGTTCGCC CGCCTGTCGGTATTCGACTCGATCCTCAAGTACAACCCGGAGCTGACCGCTGCCGACCTGCAGGACGTCGACCGCGCCCG CGACATCGCCAAAAAGGCCGGCGCCAAGGTGCTGGGCCACGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAGCAGCCGCACTTCATTACCGAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GACAACCCGGCTGTTACCGACCGTTTCGAGCTGTTCATCGGTGGCCGCGAGATCGCCAACGCCTACTCCGAGCTCAACGA TGCCGAAGACCAGGCCGAGCGCTTCCTGGCCCAGGTGGCCGAGAAGGACGCCGGTGACGACGAAGCCATGCACTACGACG CCGACTTCGTTCGCGCACTGGAGTACGGCATGCCGCCGACTGCAGGTGAAGGTATCGGTATCGACCGCCTGGTGATGCTG TTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGTCCGCAGGCCTGA Protein sequence : MSDLKTEAQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFA RLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRND DNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-138 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-78 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007228017.1 | lysyl-tRNA ligase | VFG1668 | Protein | 5e-138 | 60 |
