Gene Information

Name : xerD (B479_05660)
Accession : YP_007227991.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1274913 - 1275809 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCCGCCCTAGACCACCCCCTGATCGACCAGTTCCTCGACGCCCTGTGGCTTGAAAAGGGCCTGTCCGACAACACCCG
CATGTCCTACCGCAGCGACCTGGCCCTGTTCAACGGCTGGTTGCAGGAACACGGCGTCAGCTTGCCCGATGCCGGTCGCG
ACCTGATTCTCGACCACCTGGCCTGGCGCCTCGACCAAGGCTACAAGCCGCGCTCCACGGCACGCTTCCTGTCCGGCCTG
CGCGGTTTCTTCCGCTACCTGCTGCGGGAAAAGCTGGTGGCCATCGACCCGACCCTGCAAGTCGACATGCCGCAACTGGG
CAAGCCGCTGCCCAAGTCGTTGTCCGAAGCCGACGTCGAAGCCTTGCTGCAGGCCCCGGACCTGAGCGAAGCCATTGGCC
AGCGTGACCGCGCCATGCTCGAAGTCCTCTACGCCTGCGGCCTGCGGGTCACCGAACTGGTCAGCCTGGCCCTCGATCAG
GTCAACCTGCGCCAGGGCGTGCTGCGGGTGATGGGCAAGGGCAGCAAGGAGCGCCTGGTGCCCATGGGCGAAGAGGCGGT
GCTTTGGTTGCAACGCTACCTGCGCGATGGCCGCGCCGAACTGCTCAATGGCCGCCCCAGCGATGTCTTGTTCCCCAGCC
AGCGTGGCGAGCAGATGACCCGCCAGACCTTCTGGCATCGCATCAAGCATCATGCGCGGGTCGCCGGTATCGACAAACCG
CTGTCGCCGCATACCCTGCGCCATGCCTTCGCTACTCATCTGCTCAACCATGGTGCCGACCTTCGCGTGGTGCAGATGCT
GCTGGGCCATAGTGACCTTTCGACCACGCAGATCTACACCCATGTCGCCAAGGCCCGCCTGCAGCAATTGCATGCCCAGC
ACCACCCGCGTGGATGA

Protein sequence :
MPALDHPLIDQFLDALWLEKGLSDNTRMSYRSDLALFNGWLQEHGVSLPDAGRDLILDHLAWRLDQGYKPRSTARFLSGL
RGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDLSEAIGQRDRAMLEVLYACGLRVTELVSLALDQ
VNLRQGVLRVMGKGSKERLVPMGEEAVLWLQRYLRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-67 62
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-67 62