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Name : B479_05530 (B479_05530) Accession : YP_007227965.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 1250084 - 1251286 bp Length : 1203 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTCGACCTCGCCGGCAAGACCCACAAGGCCAGCTTGCAGGCCGACAGCGAACGTCA TGCCCGCCAGTTGTTGCGTGAGCAGGGCCTGTTCGCCCGCCGCTTGCAGCGTCACGAAGCCGGCACCCGGCAACCCCGGC GCCAGCGCCTGAGCCGCGCCCAGCTATGCGAACTGACTCGTCAGCTGGCCACCCTGACCGGTGCCGGTATCCCTCTGGTC GACGCCCTGGCTACCCTGGAACGGCAACTGCGCCAGCCCGCCTTGCACAGTGTGCTGGTGGCCTTGCGCGGCTCGTTGGC CGAAGGCCTGGGCCTGGCTCGCAGCCTGGCACGTCAGGGGGCACCGTTTACCGGCCTGTACTGCGCGCTGGTCGAGGCCG GCGAGCGGTCCGGTCGCCTGGCCCAGGTGCTGACCCGCCTCGCTGACCACCTGGAGCAGGTTCAACGACAGCAGCACAAG GCACGTACCGCGCTGATCTACCCCACCGTGTTGATGGGGGTGTCGCTTGCCGTGGTGGTAGGCCTGATGACCTTCGTCGT ACCCAAGCTCACCGAACAATTCGCCCATGCCGGGCAAAGCCTGCCGCTCATTACCTCGTTGCTGATCGGCCTGAGCCAAG GGCTGGTGCAGGCCGGGCCCTGGCTTTTGGCGCTGGCCCTGTTGCTTGGCGCGCTCGGCGGCTGGTTGCTGCGCAAGCCG CACTGGTGCCTGCGCCGTGACCAGCTGCTGCTACGCCTGCCACATATAGGCAACCTGCTGCAGGTGCTGGAAAGCGCGCG CCTGGCACGCAGCCTGGCAATCCTCAGCGGCAGTGGCGTGGCCCTGCTCGAAGCCCTGCAAGTGGCCACCGAAACCGTCG GCAACCGCCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAGCAAGTTCAGGGCGGCACCAGCCTGCATCGCGCGCTGGAT GCCTGCCAGCAGTTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTGGCCGACATGCTCGA GCGCGTGGCCGATGACCAGGAGCGCGGCTTCGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGTTGCCGATCATGCAACTCAACCAGGGCCTGCAACTG TGA Protein sequence : MPTYRYQAVDLAGKTHKASLQADSERHARQLLREQGLFARRLQRHEAGTRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGRLAQVLTRLADHLEQVQRQQHK ARTALIYPTVLMGVSLAVVVGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVQAGPWLLALALLLGALGGWLLRKP HWCLRRDQLLLRLPHIGNLLQVLESARLARSLAILSGSGVALLEALQVATETVGNRRIRLAMEQVRQQVQGGTSLHRALD ACQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-54 | 43 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-55 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B479_05530 | YP_007227965.1 | general secretion pathway protein F | VFG0181 | Protein | 7e-59 | 43 |
| B479_05530 | YP_007227965.1 | general secretion pathway protein F | VFG2049 | Protein | 8e-53 | 41 |
