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Name : B479_05525 (B479_05525) Accession : YP_007227964.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1248632 - 1250080 bp Length : 1449 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCTGCCTTATCGCCAGGCACGGCAGAGCGGGGTGGCCATGGCCCCTGCGGAGCAGGGCTGGCAGCTATGGTTGCGGCA TGACGCCGACAGCGCCCAATTGCAGGAGCTGCTGCGCGTGCACGGCCAGCCCAGCCTGCTCGAATACCTGGAGCCTGCAC TGTTCGACGAACGCCTCGGCCAGCTGTACCAGGCCGGCGATGCCGCCACCGAGGCGCTGATCGAAGGCATCGGCGACCAG GTCGACCTGGACAGCCTGATGAGCGAAATGCCGCGCATCGAGGACCTGCTGGAAAGCGACGACGAAGCCCCCGTAATCCG CCTGATCAACGGCCTGTTCGGCCAGGCCCTGCGCCTGCGTGCCTCGGACATTCACATAGAAACCTTCGAGCAGAGCCTGG TGGTGCGCTTGCGCGTCGATGGCCACCTGCGCGAAGTGTTGCGCCCACCGCGTGCGTTGTCGGCCATGCTGGTGTCGCGG ATCAAGGTCATGGCCCGTCTGGACATCGCCGAAAAGCGCCAGCCCCAGGATGGCCGTATCACCCTGCGTGCGGCGGGGCG CGAAGTGGATGTGCGGGTCTCGACCCTGCCCGGCATCCATGGTGAACGGGTGGTGATGCGTGTGCTCGACAAGCAGGCCA GCCTGCTGGCGCTGGGCAACCTGGGCATGCCGGCAGCGGTATTGCACGGCCTGCGCAGTTGCCTGGTGCGGCCCAACGGC ATCGTGCTGTCCACGGGGCCGACCGGTTCGGGCAAGACCACTACCCTGTATGCCAGCCTCAACAGCCTCAACGACGGCAG CCGCAACATCCTCACGGTCGAGGACCCGGTGGAATACGCTATCGCAGGCATCGGCCAGACCGCCATCAACCCGCGTGCCG GGCTGACCTTTGCCAGCGGCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGCTTGGCGAAATCCGTGACCAG GAGACCGCGCAGATCGCCGTGCAGGCCAGCCTCACCGGCCACCTGGTGTTGTCCACGCTGCACACCAACAGTGCGGTGGG CGCGGTGACCCGCCTGCGCGACATGGGCATCGAACCGTTCCTGATTGCCTCGTGCCTGCGCGGCGTACTGGCCCAGCGCC TGGTGCGGCGCTTGTGCAGTTGCGCCGTGGCGCACCCGCTGCAGCCGGCGGAACGCGACCTGTGGCCCGAGCTGGCGGCG CTGGGCAGCAGCTACCACGCGGTGGGCTGCGAGCAGTGCCAGGGCAGCGGGTATGTCGGGCGCCTGGGCCTGTATGAATT CATCGAGCTGGATGCCGGGCTGATCGGCCTGTTGTACGACGGCGCCAGCGAACTGGCCATGCAGGACTACCTGGCCGAGC GCCGGCAGAGCCTGGTGGCGATGGCCAGTGACTGCCTGGCCCGTGGCGAGACCAGCCTGGCCGAAGTACTACGCGTGGTG CAGGGCTGA Protein sequence : MLPYRQARQSGVAMAPAEQGWQLWLRHDADSAQLQELLRVHGQPSLLEYLEPALFDERLGQLYQAGDAATEALIEGIGDQ VDLDSLMSEMPRIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRALSAMLVSR IKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQASLLALGNLGMPAAVLHGLRSCLVRPNG IVLSTGPTGSGKTTTLYASLNSLNDGSRNILTVEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQ ETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLCSCAVAHPLQPAERDLWPELAA LGSSYHAVGCEQCQGSGYVGRLGLYEFIELDAGLIGLLYDGASELAMQDYLAERRQSLVAMASDCLARGETSLAEVLRVV QG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-105 | 57 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-105 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG2048 | Protein | 8e-105 | 56 |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG0182 | Protein | 1e-103 | 55 |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG1876 | Protein | 3e-108 | 50 |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG2426 | Protein | 2e-65 | 48 |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG1880 | Protein | 2e-67 | 45 |
| B479_05525 | YP_007227964.1 | type II secretion system protein E | VFG0112 | Protein | 2e-70 | 41 |
