Gene Information

Name : B479_05165 (B479_05165)
Accession : YP_007227892.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : nucleoid-associated protein NdpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1159045 - 1160052 bp
Length : 1008 bp
Strand : -
Note : COG3081 Nucleoid-associated protein

DNA sequence :
ATGCCAATCCGTCATTGCATCGTTCACCTGATCGACAAAAAGCCCGATGGCAGCCCCGCCGTGCTGCATGCCCGCGATTC
CGAACTGGCTGCCTCCGACGCCATCGAAAACCTTCTGGCCGACCTCAATGACAGCTACAACGCCAAGCAAGGCAAGGCCT
GGGGCTTTTTCCACGGCGAGTCCGGCGCCTACCCGCTGAGCGGCTGGCTGAAGCAGTACCTGGACGAAGAAAAGGACTTT
ACCTCCTTCAGCCGTGTGGCCGTGGAGCACCTGCAAAAGCTGATGGAAGAGTCCAACCTGTCCACCGGCGGCCACATCCT
GTTTGCCCACTACCAGCAAGGCATGACCGAATACCTGGCGATCGCCCTTCTGCACCACAGCGAAGGTGTGGCAGTGAACG
CCGAGCTTGATGTGACGCCTTCGCGGCACCTCGACCTTGGCCAGCTGCACCTGGCGGCGCGCATCAACCTGTCGGAGTGG
AAGAACAACCAGAACTCCAAACAGTACATTTCGTTCATCAAGGGCAAGAATGGCAAGAAGGTCTCGGACTACTTCCGTGA
CTTCATCGGCTGCCAGGAGGGCGTCGACGGCCCGGGCGAAACCCGCACCCTGCTCAAGGCCTTCAGCGACTTCGTCGAGA
GCGAAGACCTGCCGGAAGAGTCCGCCCGCGAAAAAACCCAGACCCTGGTCGAGTACGCCACTACCCAGACCAAGCTCGGC
GAACCGGTCACGCTGGAGGAGCTGTCCAGCCTGATCGACGAGGATCGGCCCAAGGCGTTCTACGACCACATCCGCAACAA
GGACTACGGTCTGTCGCCGGAAATCCCTGCGGACAAGCGCACCCTCAACCAGTTCCGCCGCTTCACCGGCCGTGCCGAGG
GGTTGTCGATCAGCTTCGAAGCGCACCTGCTGGGGGACAAGGTCGAGTATGACGAAGCGGCAGGGACCTTGATCATCAAG
GGCCTTCCGACCACCTTGGTGGATCAGTTGAAGCGGCGCAAGGACTGA

Protein sequence :
MPIRHCIVHLIDKKPDGSPAVLHARDSELAASDAIENLLADLNDSYNAKQGKAWGFFHGESGAYPLSGWLKQYLDEEKDF
TSFSRVAVEHLQKLMEESNLSTGGHILFAHYQQGMTEYLAIALLHHSEGVAVNAELDVTPSRHLDLGQLHLAARINLSEW
KNNQNSKQYISFIKGKNGKKVSDYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEESAREKTQTLVEYATTQTKLG
EPVTLEELSSLIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGDKVEYDEAAGTLIIK
GLPTTLVDQLKRRKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL104 AAP84229.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-135 81