Gene Information

Name : Echvi_0754 (Echvi_0754)
Accession : YP_007223039.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 845299 - 847911 bp
Length : 2613 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGGATTTTAAGCAATTTACAATCAAATCGCAGGAGGCTATACAAAAGGCCGCTGAGCTTTGTATGGCCGAGCAGCAGCA
GGCCATAGAGCCGGCTCACGTGCTAAAGGGTATTCTTTCTGAGGATGAAAGTGTGGTTGATTTTGTTTTCAAAAAACTGG
GTGTCAACAAGAAGTTGGTTTCCCAGAAATTGGAAGAAATCATCCAATCCTTTCCAAAGGTCAGCGGGCAGCAACCCTAT
CTTTCCAATGCCGGGAATCAGGCGTTGACCAAGGCTAAAAGTTATTTGAAGACCTTTGGAGATGAGTTTGTGGCGGTCGA
ACATTTGCTGCTGGGGATACTTTCTGGTAGTGATAAATCTGCCCAACTGCTCAAGGACCAAGGGGTGACGGAGAAAGGGC
TGATTGAAGCAATCAAAGAACTAAGACAAGGAAATAAAGTGACCGATCAAAACGCAGAAGCTAAATATAGGTCTTTGGAA
AAATACTCCAAAAACCTAAACGAATTGGCCAAAAAGGGCAAAATCGACCCTGTTATCGGCCGTGATGAGGAGATCAGGAG
GGTGTTACAGATTTTGGCCAGAAGAACCAAGAACAACCCTATTCTTCTTGGTGAGCCGGGTGTGGGTAAGACGGCTATTG
TGGAAGGCCTGGCACAACGCATTGTCAGTGGAGATGTTCCCGAAAACCTTAAATCCAAAACCTTGATCTCGTTGGACATG
GGATTGCTGGTGGCAGGTGCCAAATACAAGGGTGAATTTGAAGAGAGGTTAAAAGCAGTGATCAAGGAGGTGACCGATTC
GGATGGAGAGATTATCTTATTTATCGATGAGATCCACACCTTGATCGGAGCCGGTGGCGGCGGTGAAGGCGCCATGGATG
CTGCTAACTTGCTGAAGCCTGCCTTGGCCAGGGGTGAGCTGCATGCCATTGGAGCGACGACCCTCAAGGAGTACCAAAAG
TACGTCGAAAAGGATAAGGCCCTGGAGCGAAGGTTTCAAGCAGTAATGGTGGATGAACCGGATGCTGCCGATGCCATTTC
CATCTTAAGGGGTATTAAGGATAAGTACGAGCTTCACCATGGGGTGAGGATCAAGGATGATGCGGTAATTTCCGCAGTAG
AGCTTTCGCAACGTTATATTTCTGATCGATTCTTGCCTGACAAGGCCATTGACTTAATGGATGAGGCGGCGGCCAAGTTG
CGGATGGAAATTGACTCCCTTCCGCAGGAGCTGGACGAGCTGAACAGGAGGATCATGCAATTGGAGATCGAACGGGAAGC
CATCCGTCGAGAGAAAAACAAAGACAAGGAAGCCGTGCTGAGCAAAGAACTTGCAGAATTGTCCGAGAAGCGCCAAGCCG
TGAAGGCCAAATGGGAAAGCGAAAAGGCTGTAATTATGGGCATCCAGCGTGAAAAGGAAAATATTGATAAGTTTAAGCTG
GAAGCAGAGCAAGCAGAACGAGCAGGAGATTTTGGAAAGGTAGCGGAGATCCGTTATGGAAAAATCAGCGAAAGTGAGCA
AAAGCTAGAGTCGTTTAAGCAGCAGCTGCAAGAGATGCAGGAGGGTTCGCCCTTGCTGAAGGAGGAAGTGGATGCTGAAG
ATGTGGCGGCCGTGGTGGCCAAGTGGACGGGGATTCCTTTGTCCAGAATGCTCGAAAGTGAGCGGGAAAAACTCCTTCAC
CTGGAGGATGAGCTAGGCAAACGAGTGGCCGGTCAGCAAGAGGCCATTGCAGCGCTTTCCGATGCCGTGCGTAGAAGCCG
GGCAGGACTGCAAGATCCTAAACGGCCGATTGGATCCTTTATTTTCATGGGGACCACTGGTGTGGGTAAGACAGAACTGG
CCAAGGCCCTGGCAGAATACCTCTTCAATGATGACAATGCCATGGTGAGGATTGACATGTCCGAGTACCAGGAAAGGCAT
GCGGTCAGCAGGTTGGTCGGAGCGCCTCCCGGTTATGTGGGCTATGATGAAGGTGGGCAGCTGACCGAGGCGGTTAGGAG
AAAGCCTTATTCGGTTATTCTTTTGGATGAGATCGAAAAAGCCCATCCCGATGTGTTCAATATCTTGCTGCAAGTGCTGG
ATGATGGTAGGTTGACAGACAATAAAGGTCGGATGGCCAATTTCAAAAATACCATCATCATCCTGACGACCAATATCGGT
TCGCAACTGATCCAAGAGCGGTTTGCAGCAATAGAGGATTGGAACAAGGAGCAGGTGATGGAGGATACCAAAAAAGAAGT
GTTTGAGCTGTTGAAGCAGTCTGTTCGTCCGGAGTTCTTGAACAGGATTGATGAGACCATCATGTTTGAGCCACTGAGCA
GGGAGATTACCCGAAAAATTGTGGATATCCAATGGAAAGAAATCCAGCACCGTTTGGCAGATTCAGGCATCGAAATCGAT
GCCACCAAAGAAGTGCTTGATTACCTCGGAGAAGTCGGTTTCGATCCGCAGTTTGGCGCGAGGCCCCTTAAACGAACCAT
GCAGCGTTTGGTCTTAAATGAACTGTCCAAACAGATCCTCAGCGGATACATCAAGAATGATGCAGCCGTTCTGGTGGACT
TGGATGCTGATAAGCAAGTTTACTTTAAGAATGTGGAAGGAGTGGAGGTGTAG

Protein sequence :
MDFKQFTIKSQEAIQKAAELCMAEQQQAIEPAHVLKGILSEDESVVDFVFKKLGVNKKLVSQKLEEIIQSFPKVSGQQPY
LSNAGNQALTKAKSYLKTFGDEFVAVEHLLLGILSGSDKSAQLLKDQGVTEKGLIEAIKELRQGNKVTDQNAEAKYRSLE
KYSKNLNELAKKGKIDPVIGRDEEIRRVLQILARRTKNNPILLGEPGVGKTAIVEGLAQRIVSGDVPENLKSKTLISLDM
GLLVAGAKYKGEFEERLKAVIKEVTDSDGEIILFIDEIHTLIGAGGGGEGAMDAANLLKPALARGELHAIGATTLKEYQK
YVEKDKALERRFQAVMVDEPDAADAISILRGIKDKYELHHGVRIKDDAVISAVELSQRYISDRFLPDKAIDLMDEAAAKL
RMEIDSLPQELDELNRRIMQLEIEREAIRREKNKDKEAVLSKELAELSEKRQAVKAKWESEKAVIMGIQREKENIDKFKL
EAEQAERAGDFGKVAEIRYGKISESEQKLESFKQQLQEMQEGSPLLKEEVDAEDVAAVVAKWTGIPLSRMLESEREKLLH
LEDELGKRVAGQQEAIAALSDAVRRSRAGLQDPKRPIGSFIFMGTTGVGKTELAKALAEYLFNDDNAMVRIDMSEYQERH
AVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRMANFKNTIIILTTNIG
SQLIQERFAAIEDWNKEQVMEDTKKEVFELLKQSVRPEFLNRIDETIMFEPLSREITRKIVDIQWKEIQHRLADSGIEID
ATKEVLDYLGEVGFDPQFGARPLKRTMQRLVLNELSKQILSGYIKNDAAVLVDLDADKQVYFKNVEGVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-101 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-101 43