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Name : Echvi_0060 (Echvi_0060) Accession : YP_007222372.1 Strain : Echinicola vietnamensis DSM 17526 Genome accession: NC_019904 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 57956 - 59830 bp Length : 1875 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : ATGATAAAATGGATCACCCGTACAATTGATTCGGTGATTCTATTTCATTCCATTGTCCTTGCATATTTTTTAAGATTTAA TTTTGAGTGGGAAGTTATCCATCAGTATCCAGTTTTGGATAGTGGATTGCTTTTTATGTTTTTAGGAGTAGGAGCGATGC TTTTGACGGAAAAGGAGAAGTGGCTTGGAAGTAGATCACGGATAGGAAATTTCGCTTTAGTGGCGCATACCGTCATGGTA GCACTTATGCTAGCATCTCTAGCCTGTTTGGTGACAGAAAAGCTGGTGCTAAAGGCTCCCTTCGTGCCTATTTCTGTACT CGTTATAGGTGCGCTTTTAGCGTATTTTTTCATGTCTTTATATCGATTGTTTGTCAAGGAGTTCTATGGGATGTATTTAA AGAAAAAACAGCCACAAAAGCATATTGTGATTTTCGGGGCTGGTGAAGCGGGGAGGCTGTCCAAAACGGTTTTAGGAAGC CAAGTCGGATCCAATCAAAAGATCCATGCCTTCTTGGATGATGATATGCAGAAAGCAGGAGGAAGCATTGGCGGGATACC TGTTTATCATGGACTGGATCGGCTCAAAACCCTCCAGAGAGATCATGCCATTTCTGATTTATTGATTTCTATTATGTGCA TTTCCCCAAGAAGGAAAAAGGAAATTATTGAGGAATGTTTGCAGCTGGGGATCAAGGTAAGTGTCGTGCCATCCATTGAC GAATGGGTGAAGGGAGGTTTTAACGTGGGTAAGATTCGGCAAATCAAAATCGAAGACTTACTGTCCCGACCTGAAATATC ACTGGATAACCCAGCGGTGTTCAGCCAAATCTCAGATCGGGTGGTCATGGTGACCGGGGCCGCAGGATCCATAGGGAGTG AGTTGTGCCGTAAGATTATCGAGCATAAGCCAGCCTTATTGATTATGGTGGATAAAGCGGAATCAGCGCTTTATGACGTA GAGCAAGAGTTTAGGAGTGGTCGTTGGAAAAGCCAAATCAAGCCTATCTTGGCAGATATTCGAGATGCCAAAAAGATGGA TCGTATTTTCAAAATGTACAAACCTGCTATTGTATACCATGCAGCCGCCTACAAACATGTTCCCATGATGGAGAACTATC CAGAGGAGGCTGTTACCAGTAATGTGCTGGCCACCAAAAATCTTGCGGACTTGTCGGTGCTGCATAATGTAAGTCAGTTT GTTTTTGTCAGTACGGACAAGGCGGTAAACCCGACCAATGTAATGGGGGCGTCCAAGCGGATAGCGGAAATTTATATCCA AGCTTTGAGCAGGTATCTTGATGTGGAAAAGGGCCAAGTCACAAAATTTGCCATTACCCGGTTTGGAAATGTGCTAGGGT CCAATGGCTCTGTCATCCCACTGTTTAAGAAGCAGATTGAACAAGGAGGGCCTGTTATGGTCACCGATCCCAATATTTCA AGGTATTTCATGACCATCAGTGAGGCTTGTCAGTTGATACTTGAGGCTGGAGCGATGTCCACTGGAAACGAAATTTTTAT TTTTGATATGGGAGAGCCTGTGAAGATCCTGGATCTGGCCAAGAAAATGATCCAGTTAAGCGATAAAAAAATAGGAGAAG ACATCAAAATCGTATTTACAGGACTACGTGAAGGTGAAAAGTTGCACGAAGAGCTCCTGTGTCATTCAGAGCAGCTACAG ATCACCCACCATCCCAAAATCCGAGTGGTGAAAATGGGCGATATGGCTTTCAGTAAGGTGAATTATCAAATAGAGTTTTT TGAGCGATTGTTAATCTTAAGTTCGGACACTGAAATTGTCAGACATATTAAGCATATTGTGCCCGAATACGTCAGCAATA CCTCTCGGTACCATGTTTTGGATCGGTTAAATTGA Protein sequence : MIKWITRTIDSVILFHSIVLAYFLRFNFEWEVIHQYPVLDSGLLFMFLGVGAMLLTEKEKWLGSRSRIGNFALVAHTVMV ALMLASLACLVTEKLVLKAPFVPISVLVIGALLAYFFMSLYRLFVKEFYGMYLKKKQPQKHIVIFGAGEAGRLSKTVLGS QVGSNQKIHAFLDDDMQKAGGSIGGIPVYHGLDRLKTLQRDHAISDLLISIMCISPRRKKEIIEECLQLGIKVSVVPSID EWVKGGFNVGKIRQIKIEDLLSRPEISLDNPAVFSQISDRVVMVTGAAGSIGSELCRKIIEHKPALLIMVDKAESALYDV EQEFRSGRWKSQIKPILADIRDAKKMDRIFKMYKPAIVYHAAAYKHVPMMENYPEEAVTSNVLATKNLADLSVLHNVSQF VFVSTDKAVNPTNVMGASKRIAEIYIQALSRYLDVEKGQVTKFAITRFGNVLGSNGSVIPLFKKQIEQGGPVMVTDPNIS RYFMTISEACQLILEAGAMSTGNEIFIFDMGEPVKILDLAKKMIQLSDKKIGEDIKIVFTGLREGEKLHEELLCHSEQLQ ITHHPKIRVVKMGDMAFSKVNYQIEFFERLLILSSDTEIVRHIKHIVPEYVSNTSRYHVLDRLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-74 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-76 | 42 |
