Gene Information

Name : Echvi_0481 (Echvi_0481)
Accession : YP_007222776.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 529441 - 530970 bp
Length : 1530 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGAGTACAATAGCCCAAGAGAAACCGGCGACAATGCTGGATCGCCCAGATTTCAAACCGCATTATGACAATTTCATTGG
TGGGAAATTTGTTCCTCCTGTGGATGGAGAATACTTCGATGTCATCAGCCCGGTGGATGGCCAAGTATTTACCAAAGTGG
CCCGTGGAAAAGCTGCCGACATCGAACTGGCGTTGGATGCAGCCCATAAGGCATTTCCCGCCTGGAGCCGGACTTCCGCC
ACCGAAAGAAGCAATATCCTGCTGAAAATCGCCGATCGTATAGAAAACAAACTGGAATACCTAGCAGCCGTAGAAACCAT
TGATAATGGTAAACCAGTAAGAGAGACCATCAATGCTGACTTGGCATTGGTGGTCGATCATTTCAGGTACTTCGCTGGGG
TGATCAGGGCAGAAGAAGGCAGCATCGCTGAACTCGACCAACATACCGTTTCCGTGAACGTCAAAGAACCCATCGGAATC
GTGGGCCAAATTATCCCCTGGAATTTCCCCATGCTCATGGCCACTTGGAAAATGGCCCCCGCATTGGCTGCAGGCTGCTG
TACCATCGTCAAGCCTGCCGAACAGACCCCTGCCTCCATCATGATCCTGATGGAAGTCATCGGTGACCTCCTCCCTGCCG
GGGTCCTCAACGTCGTCAACGGCTTTGGGCCAGAAGCGGGAAAACCACTCGCCCAATCTCCAAGGCTGGACAAGGTCGCC
TTCACCGGTGAAACCACCACTGGCCGCCTCATCATGCAGTATGCCTCCGAAAACCTCAACCCCGTCACCATGGAACTCGG
CGGCAAGTCTCCTAATGTCTTTTTTCCATCCGTCATGGATGCAGACGATGAGTTCTTGGACAAATGCCTGGAAGGAGCAG
TGATGTTTGCGCTTAACCAAGGTGAAGTCTGCACCTGCCCAAGCCGGATTTTGGTCCATGAAAAAATCTACGATGCCTTT
ATGGAAAAAGTAATCGCTAGGGCGGAGGCCATCCAAATGGGGCACCCGCTGGACAAAACCACCATGATGGGCGCCCAAGC
TTCCAAAGATCAATTTGAAAAAATCCTTAGCTATATCGACATCGGAAAACAAGAAGGAGCAGAAGTCCTGACAGGCGGAG
AAGTCGCCAAACTCAACAGCGGTTTGGAAAATGGCTATTATGTGAAGCCTACTTTGCTGAAAGGCCATAACAAAATGCGC
GTATTCCAAGAAGAGATCTTCGGACCGGTATGCTCGGTGGCCACTTTCAAGGACGTGGAAGAAGCCATTTCCATTTCCAA
CGACACCTTGTACGGCCTAGGAGCAGGCGTATGGACCAGAGATGCCCATGAAGCCTACCAAGTGCCCCGTGCCATCAAGG
CAGGTCGTGTCTGGGTAAACTGCTACCACGCCTACCCGGCCCATGCACCATTTGGGGGATACAAAAAATCAGGCTTTGGC
AGGGAAACCCACCTGATGATGCTCAACCATTACCGCCAAAACAAAAACATGCTGATCTCTTATGACAAAAACAAATTAGG
GTTCTTTTAA

Protein sequence :
MSTIAQEKPATMLDRPDFKPHYDNFIGGKFVPPVDGEYFDVISPVDGQVFTKVARGKAADIELALDAAHKAFPAWSRTSA
TERSNILLKIADRIENKLEYLAAVETIDNGKPVRETINADLALVVDHFRYFAGVIRAEEGSIAELDQHTVSVNVKEPIGI
VGQIIPWNFPMLMATWKMAPALAAGCCTIVKPAEQTPASIMILMEVIGDLLPAGVLNVVNGFGPEAGKPLAQSPRLDKVA
FTGETTTGRLIMQYASENLNPVTMELGGKSPNVFFPSVMDADDEFLDKCLEGAVMFALNQGEVCTCPSRILVHEKIYDAF
MEKVIARAEAIQMGHPLDKTTMMGAQASKDQFEKILSYIDIGKQEGAEVLTGGEVAKLNSGLENGYYVKPTLLKGHNKMR
VFQEEIFGPVCSVATFKDVEEAISISNDTLYGLGAGVWTRDAHEAYQVPRAIKAGRVWVNCYHAYPAHAPFGGYKKSGFG
RETHLMMLNHYRQNKNMLISYDKNKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-155 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-160 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-160 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-160 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-159 62
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_0481 YP_007222776.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 9e-156 63