Gene Information

Name : Echvi_4443 (Echvi_4443)
Accession : YP_007226635.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : type I restriction system adenine methylase HsdM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5315018 - 5316601 bp
Length : 1584 bp
Strand : -
Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM)

DNA sequence :
ATGTCAGAAGATCAAAAACAAAAGCTGGAAAGTCAATTATGGGGTATTGCCAACCTCCTTCGTGGAAAGATCAGTGCGGA
TGATTATAGGGATTATATCCTGGGCTTTATATTCTACAAATACCTTTCCGAAAAACAATACCTCTATGCCAATGAGCTGC
TCAAGAGTGAGGGAATAGAAGATTATGCGAGCTTAACTGAATCGGATTTATTGGATGCCATTAAGGAAGAATCATTATTG
AAATTGGGCTACTTCTTACAGCCTCAAGAACTTTTTTCAGCTTTGGCGGCCAAGGGGAATACCGATTATGAAGATCCTGA
TAAGGTGGAGGGTAATGGCAGCAATTATATCCTGGATGATCTGCAAGCCGTGCTGAACCATATTGAGCAGAGCACTATGG
GTACGGAGTCGGAAGATGATTTTAATGCCCTGTTCGAGGATCTTGACCTGAACTCCACCAAGATCGGCCGTACACCCAAT
GCCCGAAATGAGATCATCGTGCAGATCCTTAATCGCTTGAATCAAATCGATTTTAAACTAGAATATATTCATTCTGACGT
ATTGGGCGATGCCTATGAATACCTGATTGCGAAGTTTGCTGCCGGTGCTGGCAAATCAGCAGGGGAATTTTATACCCCGC
AGCAGGTGTCCAAGATTTTGGCTAAAATCGTGACCACAGGAAAATCTAAACTAAAGTCAGTGTACGATCCTACCTGTGGT
TCTGGTTCCTTACTCCTTCGAGTAGCGAAAGAGGCGACGGTAAGTGAATATTATGGGCAAGAGCTGAATCGTACCACTTA
TAACCTTGCGCGGATGAATATGATCCTTCATGATGTGCATTTCAGTGATTTTGATATCCGCCATGAGGACACCCTGGAAA
ATCCCCAGCATAAGGATGAACGTTTTGAAGCCATCGTGGCCAATCCGCCTTTTTCGGCTCACTGGAAATCAGATGCCAAT
CCTCTGAATGCCACTGATGAGCGTTTCAGTCAATATGGCAAGTTGGCACCCAAAACCAAAGCGGATTATGCCTTTGTGCA
GCACATGCTGTATCATCTGGCAGACAATGGCATTATGGCTTGTGTGCTTCCCCATGGGGTGCTCTTTCGTGGTGCATCCG
AAGGAATTATTCGCCAGTACCTGATAAAGGAACTCAATTACTTAGATGCAGTGATCGGCCTCCCTGCCAATATCTTTTAT
GGGACTTCTATTCCTACCTGTATTTTGGTGCTCAGTAAGTGCCGAAAGTCGGATGATAATATAGTCTTTATTGATGCCAG
TGGAGAGGATCACTATGTAAAGGAAAAGAACCAGAATGCTTTGCGGGACCAGGATGTGGAATTGATCGTGGACACCTATC
AAAATCGTAAATCCATCGACAAGTTCAGTTATGTGGCCAACTTAGCAGAGATCGCTGAAAATGACTATAACCTCAATATC
CCTCGCTATGTGGACACTTTTGAAGAGGAAGAACCGGTGGATATTGATGCTGTAATGAAAGAAATCAAAAGTTTGGAGGC
CAAGCGGGCAGAACTGGATCAGGAAATTGCCGGGTATTTTAAAGAACTGGGCTTGAATTTTTAA

Protein sequence :
MSEDQKQKLESQLWGIANLLRGKISADDYRDYILGFIFYKYLSEKQYLYANELLKSEGIEDYASLTESDLLDAIKEESLL
KLGYFLQPQELFSALAAKGNTDYEDPDKVEGNGSNYILDDLQAVLNHIEQSTMGTESEDDFNALFEDLDLNSTKIGRTPN
ARNEIIVQILNRLNQIDFKLEYIHSDVLGDAYEYLIAKFAAGAGKSAGEFYTPQQVSKILAKIVTTGKSKLKSVYDPTCG
SGSLLLRVAKEATVSEYYGQELNRTTYNLARMNMILHDVHFSDFDIRHEDTLENPQHKDERFEAIVANPPFSAHWKSDAN
PLNATDERFSQYGKLAPKTKADYAFVQHMLYHLADNGIMACVLPHGVLFRGASEGIIRQYLIKELNYLDAVIGLPANIFY
GTSIPTCILVLSKCRKSDDNIVFIDASGEDHYVKEKNQNALRDQDVELIVDTYQNRKSIDKFSYVANLAEIAENDYNLNI
PRYVDTFEEEEPVDIDAVMKEIKSLEAKRAELDQEIAGYFKELGLNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF6 BAC22943.1 - Not tested etd PI Protein 4e-136 56
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 8e-137 56
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 3e-136 56
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 1e-136 56
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 6e-137 56
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 6e-137 56
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 6e-137 56
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 6e-137 56
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-137 56
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 6e-137 56
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 9e-137 56
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 4e-136 56
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 6e-137 56
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-137 56
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 7e-137 56
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 1e-136 56
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 9e-137 56
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-137 56
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 2e-135 55
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-135 55
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-135 55
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 3e-136 55