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Name : Echvi_4409 (Echvi_4409) Accession : YP_007226603.1 Strain : Echinicola vietnamensis DSM 17526 Genome accession: NC_019904 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate-sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 5272315 - 5273403 bp Length : 1089 bp Strand : - Note : PFAM: NAD dependent epimerase/dehydratase family DNA sequence : ATGATTGGAACAACTGAAGGACATCAACTCTCCGGAGCAAAAGTATTGGTCACGGGCGGAGCCGGGTTTATCGGCTCCAA CCTGATCGACGCCCTGCTGGAAGCCGGAAGCCGGGTGGTCTGTTTGGATAATTTCTCCACGGGCAAACGGACAAACTTGG AAAAGGCCCTGACCTCTTCCCGGTTTAGCCTGATCGAAGGGGATATTCGGGATTATACCACTTGTGCCGAGGCCGTGGAG GGATGCAAATGGGTGTTCCATCAAGCAGCATTGGGCTCTGTGCCGCGATCGATCGCCGACCCCATGACCTCTACCGATGT GAACATAGGGGGCTTCGTCAAAGTGCTCTTTGCCGCCAAGGAAGCAGGTGTACAGCGGGTGGTCTACGCGGCAAGCTCTT CAACATACGGTGATCATCCCGACCTGCCCAAGGTAGAGCATGTCATCGGCAATGCCCTTTCACCCTATGCCATCACCAAA TATGTGGACGAGTTATTTGCCAAGAACTTTGCCGACACCTATGGGCTGGAAACCATTGGCCTGCGGTATTTCAACGTATT TGGCAGGAGACAGGATCCCGACGGGGCCTATGCAGCCGTCATCCCGAAATTTGTGCGGTGCCTGGTGGAAGGGGAATCCC CAAGGATTAACGGGGACGGTTCCTTTTCCAGGGACTTTACCTATATCGACAATGTCATCCAGGCCAATGTCAAGGCGGCC GTGACCGGGACGGCACTGATGAAGGCAAACCTTGCAGAGTATCATGCCCATATCGGCCGGCCGTTCAACACCGATGCGGT CATCTCAGAAGTGTTCAACGTGGCTTTTGGGGAGCGGGTAAACCTGAACGAGCTGGGAAGTTACCTGAAAGAAGAACTGT CAAAATTTGACAAGGAAATATCCGGGATCCCCATGGAATACGGTCCGCAGCGGGCCGGTGATGTGCCCCATTCCCTGGCT TCCATCGAGAAGGGCAGAAAGGTGATAGGGTATGAACCTGAATATTCCGTAAGGCAGGGACTGGGATTGGCATGTGAATG GTATTGGAATAGTTTTAAAAAAGAGCGTAACTTTGAAGCTGATTTTTAA Protein sequence : MIGTTEGHQLSGAKVLVTGGAGFIGSNLIDALLEAGSRVVCLDNFSTGKRTNLEKALTSSRFSLIEGDIRDYTTCAEAVE GCKWVFHQAALGSVPRSIADPMTSTDVNIGGFVKVLFAAKEAGVQRVVYAASSSTYGDHPDLPKVEHVIGNALSPYAITK YVDELFAKNFADTYGLETIGLRYFNVFGRRQDPDGAYAAVIPKFVRCLVEGESPRINGDGSFSRDFTYIDNVIQANVKAA VTGTALMKANLAEYHAHIGRPFNTDAVISEVFNVAFGERVNLNELGSYLKEELSKFDKEISGIPMEYGPQRAGDVPHSLA SIEKGRKVIGYEPEYSVRQGLGLACEWYWNSFKKERNFEADF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 1e-65 | 49 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 1e-65 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Echvi_4409 | YP_007226603.1 | nucleoside-diphosphate-sugar epimerase | VFG0430 | Protein | 5e-66 | 49 |
