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Name : Echvi_4400 (Echvi_4400) Accession : YP_007226594.1 Strain : Echinicola vietnamensis DSM 17526 Genome accession: NC_019904 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 5259936 - 5261255 bp Length : 1320 bp Strand : - Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGAATACAGCTCTTTTACCTTTGCACCAATCTAAAATTGCGGTGATTGGTTTAGGTTATGTCGGTTTACCGCTAGCGGT TGAATTAGCCAAGTACTATCCTACTGTGGGTTATGATATTTCTCCCAAAAGGATAGAAGGATTAGAAGAAGGGCATGATT TTACTTTGGAAGTAGAGGATGAAAAGTTACAATCTTCTTTAGTGAAGTCTTCGATCGGTTTGGATCATAAAGGCAAAGGC TTTTTACCTTCGAATGACGTTTCAGAAATTTCATCCTGCAATATTTTTATTGTAACTGTTCCAACCCCTATAAATGAACA TAAGACACCGGATCTTCAACCATTGATTGCAGCGAGTACCATGTTGGGAAAACTTTTAAAGAAAGGAGATGTGGTCATTT ATGAATCTACCACCTATCCGGGATGTACAGAAGAAGATTGCGTACCGATATTGGAGCGTGAATCTGGTTTGATATTTAAT CAGGATTTTTATTGTGGTTATTCCCCAGAAAGGATTAATCCAGGAGATAAGGTGAACACCTTGACCAAAATCAAAAAAGT GACTTCGGGTTCAACCCCAGAAGTTGCGGACTATGTAAATGAACTTTATGCTTCAATTATTGAGGCAGGTACCTATAAAG CTTCAAGTATTAAGGTAGCAGAAGCTTCTAAAGCTATAGAAAATGCCCAAAGGGATGTCAATATTTCCTTTGTCAACGAA TTGGCCTTAATTTTCGATCGCTTAGGTATTGATACGAATGAGGTGTTGGAAGCTGCTGGTACTAAATGGAATTTCTTAAA ATATAAGCCTGGCTTAGTAGGAGGACACTGTATAGGGGTAGATCCTTATTATTTGGCCCATAAGGCTGAGCAAGTTGGCT ATCATCCTGCAGTTATCCTCTCTGGAAGAAGAGTAAATGATAATATGGGGATGTTTGTGGCCAATAAAGTGATCAAATTG ATGATCCAAAAAGGTAAGACCATTAAAGGAAGTAAGGCATTAATTTTAGGATTTACTTTTAAGGAAAATTGCCCAGATAT CCGTAATACCAGGGTTATAGATATATATAAAGAATTAAATCAATTTGGTTTAGAGGTGGATGTTTATGATCCTTGGGCCT CCAGAGAAGAAGTGCAAGAAGAATATGGAATACAACTAACTTCAAAAAATAAATTAAGTAAATATGATGCTGTTATTTTA GCTGTAGGACATAAAGAGTTTAGCGATATGGATCTTGAGGATATAAAAACTAATGGTCTGTCTGTATTGTATGATACGAA AGCGTTTTATAGAAAGGATTTAGTACATGGAAGACTTTAA Protein sequence : MNTALLPLHQSKIAVIGLGYVGLPLAVELAKYYPTVGYDISPKRIEGLEEGHDFTLEVEDEKLQSSLVKSSIGLDHKGKG FLPSNDVSEISSCNIFIVTVPTPINEHKTPDLQPLIAASTMLGKLLKKGDVVIYESTTYPGCTEEDCVPILERESGLIFN QDFYCGYSPERINPGDKVNTLTKIKKVTSGSTPEVADYVNELYASIIEAGTYKASSIKVAEASKAIENAQRDVNISFVNE LALIFDRLGIDTNEVLEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAEQVGYHPAVILSGRRVNDNMGMFVANKVIKL MIQKGKTIKGSKALILGFTFKENCPDIRNTRVIDIYKELNQFGLEVDVYDPWASREEVQEEYGIQLTSKNKLSKYDAVIL AVGHKEFSDMDLEDIKTNGLSVLYDTKAFYRKDLVHGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-119 | 58 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-119 | 58 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-100 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Echvi_4400 | YP_007226594.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-119 | 58 |
