Gene Information

Name : Echvi_0042 (Echvi_0042)
Accession : YP_007222355.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 38825 - 39874 bp
Length : 1050 bp
Strand : -
Note : PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

DNA sequence :
ATGAAATTATCAGATTTCAAATTCGAAGTTCCGAAAAAACTCATTTCTTTATATCCATCTGACAACAGGGACGAATCCCG
TCTGATGGTAGTGCACAGAGACACAGGTGAGATAGAGCACAGGGTTTTTAAAGATATAATTGAGTATTTTGATGAAGGTG
ACGTCTTCGTAACCAACAATACGAAAGTATTTCCTGCCCGGCTTTATGGAAACAAGGAGAAAACGGGCGCAAAGATCGAA
GTGTTCCTGTTGAGGGAGCTGAACCAAGAGCTTAGGCTGTGGGATGTGCTGGTAGATCCTGCCAGGAAGATCCGTGTGGG
AAACAAGCTGTATTTTGGAGACAGTGATCTGGTAGCGGAAGTGATCGATAACACGACCTCCCGTGGACGTACCATTCGCT
TTTTGTTTGATGGTACGGACGAAGAATTCTATAAGACCATCGATGCATTGGGTGAGACGCCTATTTTGAAGGAGTTCATT
GATAGGAAAGTAGAGGAGGAAGATCGGGAGCGTTATCAGACGATCTATGCTGAGCACGTGGGAGCTGTGGCAGCACCTAC
GGCGGGATTGCATTTTACGCCCCATTTACTGAAACGACTGGAGATTAAAGGGGTAGAGGTTTCGCCGATTACCTTGCATA
TTGGTTTGGGGACTTTCCGTCAAGTGGATGTGGAAGATCTTACCAAACATAAAATGGATTCGGAAAATTACGATATTCCC
GAAAAGACTGTAGACTTGGTGAATGATGCCATTGATGCCAAAAAGCGTGTGGTGGCTGTAGGCACCACTTCTCTCAAAAC
AGTGGAATCTTCCGTGACGGCCAGCAACAGGCTCAAACCATCCAGTGGCTGGACCGATAAATTCATCATTCCTCCATATG
AATTTAAAATAGCCAATGCACTGATCACAAACTTTCATTTGCCGGAGTCTACCTTGCTGATGACCACCGCAGCATTTGGC
GGATATGATTTGATCATGAAGGCATACAAGGAAGCTGTTAAAGAAAAATACAGGTTCTTCTCTTACGGAGACGCCATGTT
GATATTGTAA

Protein sequence :
MKLSDFKFEVPKKLISLYPSDNRDESRLMVVHRDTGEIEHRVFKDIIEYFDEGDVFVTNNTKVFPARLYGNKEKTGAKIE
VFLLRELNQELRLWDVLVDPARKIRVGNKLYFGDSDLVAEVIDNTTSRGRTIRFLFDGTDEEFYKTIDALGETPILKEFI
DRKVEEEDRERYQTIYAEHVGAVAAPTAGLHFTPHLLKRLEIKGVEVSPITLHIGLGTFRQVDVEDLTKHKMDSENYDIP
EKTVDLVNDAIDAKKRVVAVGTTSLKTVESSVTASNRLKPSSGWTDKFIIPPYEFKIANALITNFHLPESTLLMTTAAFG
GYDLIMKAYKEAVKEKYRFFSYGDAMLIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAF71483.1 QueA Not tested Hrp PAI Protein 8e-60 44
queA AAT96070.1 QueA Not tested T-PAI Protein 3e-57 44
queA AAT96042.1 QueA Not tested T-PAI Protein 2e-57 44
queA AAT96182.1 QueA Not tested T-PAI Protein 6e-58 44
queA AAT96122.1 QueA Not tested T-PAI Protein 3e-59 43
queA AAT96106.1 QueA Not tested T-PAI Protein 6e-57 43
queA AAF71490.1 QueA Not tested Hrp PAI Protein 5e-57 43