Gene Information

Name : Echvi_4194 (Echvi_4194)
Accession : YP_007226401.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : IS66 Orf2 like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5008360 - 5008650 bp
Length : 291 bp
Strand : +
Note : PFAM: IS66 Orf2 like protein

DNA sequence :
ATGCGCAAAAGTTTCGATGGGCTTCAGGGACTGGTCAGCTCCCATACCGACAGGGATCCCCTCTCGGGAGATGTCTTTGT
TTTCCTCAACAAGTCCAGGACACTGATCAAGCTGCTGCACTGGGAGCACGGCGGTTTTGTGCTGTACTATAAGAGGCTGG
AAAAAGGGACCTTTGTGCCCCCTTCGCCCTGGGAGGGGTGGACGGTCAGCTGGCCGGAACTGGTACTGATGGTAGAGGGC
ATCAAAGTGGAAAGGTCAAGACAGTCGCCCCGCTACGTGCACGGAAGGTAA

Protein sequence :
MRKSFDGLQGLVSSHTDRDPLSGDVFVFLNKSRTLIKLLHWEHGGFVLYYKRLEKGTFVPPSPWEGWTVSWPELVLMVEG
IKVERSRQSPRYVHGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 6e-08 41
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 6e-08 41
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-08 41
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-08 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 7e-08 41
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-08 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 7e-08 41
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-08 41
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-08 41
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 6e-08 41
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-08 41
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_4194 YP_007226401.1 IS66 Orf2 like protein VFG1709 Protein 2e-08 41
Echvi_4194 YP_007226401.1 IS66 Orf2 like protein VFG0792 Protein 2e-08 41
Echvi_4194 YP_007226401.1 IS66 Orf2 like protein VFG1052 Protein 2e-08 41