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Name : Echvi_4146 (Echvi_4146) Accession : YP_007226357.1 Strain : Echinicola vietnamensis DSM 17526 Genome accession: NC_019904 Putative virulence/resistance : Unknown Product : pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component Function : - COG functional category : - COG ID : - EC number : - Position : 4962052 - 4963395 bp Length : 1344 bp Strand : - Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA sequence : ATGAAAAAATATGATGTCATCGTCATCGGATCCGGTATGGCCGGAATGACCATCGCCAATAAATGTGCTAAGAAAGGATT AAAAACAGCTATCACCGACTCACGACCTTATGGTGGAACTTGTGCCCTTCGTGGTTGTGATCCTAAGAAAATTCTGGTGG GAGCGGCCGAAATCATTGGTAGAGTTGATAAAATGAGCGGAATAGGCATCTCAGGGGATATTTCGATTAATTGGGAAGAC TTAATGGCTTACAAAAACGATTTTGTTTCTAAAATGCCCAAAGGCGTTGAGAAAGGATATGAAAAAGCAGGTGTGAAGAA GTACCACGGAGTAGCCAGCTTCGAATCTGAAAACACTGTCCGTATTGGGAATGATCTACTGGAAGGTGGTAAAATCGTGA TTGCCACAGGTGCCAGACCAGTGACTCTTGATATTACCGGTGGAGATTTGCCCATCGACAGTACCGATTTTCTAAACTTG GAAAAGCTTCCTGAACATATCACTTTTGTTGGAGGTGGTTATATTGCGATGGAGTTTGCCCACCTTGCTGCTCGAGCGGG CAGTAAGATTACTATCTTCCATCGTGGTGAGCGTCCACTGGAAAATTTTGATGAGCATATCGTAAAACATCTTGTTAAGG CCACCAAAGATTTAGGTATTCTCTTACATGTTGAAACTGAGGTAATTGGTATTGAAAAAGATGGTGATCAGTTTATAGTC TTCACAAAATCTTCAAATGGTGAGCAAACACATCACACTGACCTTTTAGTAAATGCGGCAGGCCGAGTACCAGAGTTGGA TGGAATGAATCTGGAAAAAGCCAGTATTGCTTACAACAAAAAAGGCATTGAGGTAAATGAATATCTGCAAAGTGAGAGTA ACCCTACAGTATATGCAGCAGGTGATGCAGCTAATAGTAATGGGCTAAACCTCACGCCTGTAGCCGTAATGGAAGGACAT GCTGTGGCGGCTAACATTATCAGAGGAAATTCTAAAGTGCCTGACTATACAGAAATGCCTAGTGCAGTATTCACCCTACC CACTTTAGCAGCAGTAGGTATGACAGAAAAGCAGGCAAAGGAGTTAGATGTAGAATACCAGGTAAAAAGTGCTTCTGCCT CCAACTGGTATAATGCCAAACGGATTAATGAATCCACTTATGCCTACAAAGTGATTTCGCATAAAGATGGCCACATTTTA GGCGCTCATATCATCGGCCCGCATGCGGAAGAAATGATCAATCTTTTTGCGATGGCTATTCGAGGAAAACTCAAAGTAGC TGACATAAGGAACATGGTCTATTCCTATCCCTCTATGGGTTCGGATATCGGGTCTATGGTTTAA Protein sequence : MKKYDVIVIGSGMAGMTIANKCAKKGLKTAITDSRPYGGTCALRGCDPKKILVGAAEIIGRVDKMSGIGISGDISINWED LMAYKNDFVSKMPKGVEKGYEKAGVKKYHGVASFESENTVRIGNDLLEGGKIVIATGARPVTLDITGGDLPIDSTDFLNL EKLPEHITFVGGGYIAMEFAHLAARAGSKITIFHRGERPLENFDEHIVKHLVKATKDLGILLHVETEVIGIEKDGDQFIV FTKSSNGEQTHHTDLLVNAAGRVPELDGMNLEKASIAYNKKGIEVNEYLQSESNPTVYAAGDAANSNGLNLTPVAVMEGH AVAANIIRGNSKVPDYTEMPSAVFTLPTLAAVGMTEKQAKELDVEYQVKSASASNWYNAKRINESTYAYKVISHKDGHIL GAHIIGPHAEEMINLFAMAIRGKLKVADIRNMVYSYPSMGSDIGSMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 7e-105 | 49 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 9e-105 | 49 |
