Gene Information

Name : Echvi_3885 (Echvi_3885)
Accession : YP_007226107.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : ATP-dependent protease HslVU, peptidase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4642838 - 4643380 bp
Length : 543 bp
Strand : -
Note : PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit

DNA sequence :
ATGGAAAAATTAAGATCCACTACGGTAGTGGCGATCAAACATAACGGTGAAGTAGTCATTGGTGCGGACGGCCAGGCCAC
GTTGGGCAATACCGTGGCCAAGAGCAGTGTCAATAAAGTGAGGAAACTCCAAGGCGGAAAAATAGTCACGGGATTTGCAG
GTTCCACAGCGGATGCATTTACGCTGTTGGAAAAATTCGAAGAAAAGCTGGGAGCCTACGGAAATAATATGAAAAGGGCG
GCGGTAGAATTGGCCAAAGAATGGCGCACCGACCGTATGCTGAGTAAATTGGAGGCGATGATGATCGTCGCAGACGCTGA
TGATGTGCTGATCATTTCCGGGACAGGAGATGTGATCGAACCGGATATGGAAATTGCGACGATAGGCTCTGGGAGTATGT
ATGCCCAGTCCGCGGCCAGAGCGTTCAAAAAGTTTGCCACGCAGCTTACAGCAGAGGAAATGGTAAGGGAGAGCCTGACG
ATAGCTGCAGATATCTGCATCTACACCAACCACAATTTGGTGGTGGAAAAAGTGACCTCTTGA

Protein sequence :
MEKLRSTTVVAIKHNGEVVIGADGQATLGNTVAKSSVNKVRKLQGGKIVTGFAGSTADAFTLLEKFEEKLGAYGNNMKRA
AVELAKEWRTDRMLSKLEAMMIVADADDVLIISGTGDVIEPDMEIATIGSGSMYAQSAARAFKKFATQLTAEEMVRESLT
IAADICIYTNHNLVVEKVTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 2e-32 51