Gene Information

Name : Echvi_3567 (Echvi_3567)
Accession : YP_007225793.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4225789 - 4227660 bp
Length : 1872 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAAAACGCTCAGTCAAGAAAACATTGAATCTTACATTACCACAGATCCTTTTCCTAATTCAAAGAAAGTATATGTATC
GGGCACCTTGCATCCCATAAAGGTGGCCATGCGTGAAATCGCGCTGCATGATACCGTATCACACTTGGACCGTCATGAGA
CGGTAGAAAAAAATCCACCTGTAACGGTTTATGACACCAGTGGTCCCTATACTGATCCAGCGGCAGAGATAGATGTAAAA
AAAGGGCTTCCCAGGCTCCGCGAAGAGTGGATCACCAATACGGGAGATGTGGAACAGCTAGATCAACTCACTTCAGCATA
CGGTCAGCGAAGACTGGCCAATCCCGCATTGGATAAGTTGCGGTTTGACCTGGTGAAAATGCCTTATCGTGCCAAATCAG
GAAACAATGTAAGCCAGATGCATTATGCCAAAAAAGGCATCATCACTCCAGAGATGGAATACATTGCCATTCGTGAAAAC
CAACGCATCGCAGAACAGCAAGAACTCACCAAACAGCATCCTGGCCAAAATTATGGTGCCAATACGCCTAAAGGAATGAT
TACACCGGAATTTGTTCGGGATGAAGTGGCAATGGGCAGGGCAGTTATTCCGGCCAATATCAACCACCCCGAAGCAGAGC
CCATGATTATCGGGCGAAATTTCTTGGTTAAGATCAATGCCAATATCGGAAACTCGGCGATAGGCTCCAGTATTGAAGAA
GAAGTAGAAAAGGCCGTTTGGGCGTGCCGATGGGGAGCAGATACGATCATGGACCTTTCCACCGGAAAGAATATTCACGA
AACCCGTGAATGGATTCTTCGCAATAGCCCCGTTCCCATTGGGACGGTACCCATTTACCAAGCGTTGGAAAAAGTCAACG
GCAAGGCAGAAGACCTGACGTGGGAACTGTTTCGGGACACCCTGATCGAGCAGGCAGAACAAGGCGTGGATTATTTCACC
ATTCATGCCGGAGTATTGCTCCGTTACGTTCCCATGACCGCCAAAAGGGTGACAGGAATTGTTTCCAGGGGAGGTTCCAT
TATGGCCAAATGGTGCTTGGCCCACCACAAAGAAAATTTCCTTTACACCCATTTTGAGGAAATCTGTGAAATTATGAAAG
CGTATAACGTCACCTTTTCACTCGGGGATGGTTTACGCCCAGGATCCATTGCGGATGCCAATGATCCGGCCCAATTTGCA
GAACTTGAAACGTTGGGTGAATTGACGAAAATTGCTTGGAAACATGACGTACAGACCATTATCGAAGGCCCCGGCCATAT
TCCGATGCATATGATCAAAGAGAACATGGATAAGCAGTTGGTAGCCTGTGGGGAAGCGCCTTTCTATACCTTGGGACCAT
TGACGACGGATATTGCCCCCGGTTATGACCACATCACTTCAGGAATTGGTGCGGCGATGATCGGATGGTACGGTTGTGCG
ATGCTGTGTTATGTTACCCCTAAGGAACATTTGGGCTTGCCAGAGAAAAAGGATGTCAAAGACGGCGTCATCACCTATAA
AATCGCTGCCCATGCAGCAGATTTGGCAAAGGGACACCCTGGAGCCCAATACCGTGATGATGCCCTCAGCAAGGCCCGTT
TTGAATTCCGCTGGGAAGACCAGTTTAACCTTTCCCTAGACCCGGACACCGCAAGGTCATTCCATGATGAGACACTTCCT
GCAGATGGTGCCAAAATAGCCCATTTCTGTAGCATGTGTGGCCCCAATTTCTGCAGTATGAAAATCACCCAAGATGTAAG
GGATTATGCTGACAAGAATGGACTGAATGATCAAGAAGCCATCGAAGAAGGGATGCAAAAGAAAGCACAGGAGTTCTCCG
ATAAAGGTGGTGAAATCTATCTAAATCAATAA

Protein sequence :
MKTLSQENIESYITTDPFPNSKKVYVSGTLHPIKVAMREIALHDTVSHLDRHETVEKNPPVTVYDTSGPYTDPAAEIDVK
KGLPRLREEWITNTGDVEQLDQLTSAYGQRRLANPALDKLRFDLVKMPYRAKSGNNVSQMHYAKKGIITPEMEYIAIREN
QRIAEQQELTKQHPGQNYGANTPKGMITPEFVRDEVAMGRAVIPANINHPEAEPMIIGRNFLVKINANIGNSAIGSSIEE
EVEKAVWACRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWELFRDTLIEQAEQGVDYFT
IHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICEIMKAYNVTFSLGDGLRPGSIADANDPAQFA
ELETLGELTKIAWKHDVQTIIEGPGHIPMHMIKENMDKQLVACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCA
MLCYVTPKEHLGLPEKKDVKDGVITYKIAAHAADLAKGHPGAQYRDDALSKARFEFRWEDQFNLSLDPDTARSFHDETLP
ADGAKIAHFCSMCGPNFCSMKITQDVRDYADKNGLNDQEAIEEGMQKKAQEFSDKGGEIYLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 75
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 75
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 71