Gene Information

Name : Echvi_3170 (Echvi_3170)
Accession : YP_007225412.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3775514 - 3777616 bp
Length : 2103 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-transloc

DNA sequence :
ATGGAAAATCACGAACACCACAATCACGAAGAAATGGACCATTCTAAAATGGACCATTCGAAGATGAAACACAAAAAAGA
AGACCATTCTAAAATGAACCACAAAGGTGGGGACCATTCGGGTCACAATCCGGGTCACGGTCAAATGGGTCACGACCATC
ATAAAATGATGATTGCGGACTTTAGAAAACGGTTTTGGGTAACACTCGTGCTTACCATCCCCATATTGTTCTTCTCACCA
ATGATACAAGAATTTTTTGGTTATGAATTTTTACTTCCAGGAAATCCATACATCCTTTTTGCACTTTCCACTATTGTCTA
TTTTTATGGTGGTTGGCCATTTTTAAAAGGGTTTTGGTCTGAAGTCAAAAAAGGTGCACCAGGAATGATGACCTTGATTT
CTATGGCAATTTCCGTAGCTTATTTTTATAGTACAGCTACTGTATTTGGCTTAAGAGGTGAAGACTTTTTCTGGGAACTA
TCAACACTTATAGCCATAATGTTGCTTGGTCATTGGATAGAAATGAAAAGTGTTTTGGGTGCGTCAAAAGCGCTGCAGTT
GTTGGTGAGTATGATGCCTGCGGAAGCCCACAGGGTGAAGGGAGATACTATTGAAGACATCCCTCTTGAAGATTTACTAA
AGGATGATGTGATTTTGGTTAAACCAGGTGAAAAAGTTCCTGCTGATGGGATTATAGTAGACGGTTCAAGTTACCTGAAC
GAATCTATGCTTACAGGCGAATCCAAACCTGTAAAAAAAGATGAAAACGATAAGGTTATTGGTGGTTCGGTAAATGGTAA
CAGTACCTTAAAAGTAAAGGTTGAGCATACTGGAAAAGATAGCTTTCTCAACAAGGTCATCAAAATGGTCGAAGAAGCGC
AAAAAACCAAATCCAAGATGCAAAATCTTTCAGACAGGGCTGCAAAATGGTTAACCTATATCGCTTTGGCTATTGGTTTT
GGAACATTAGCGGTATGGCTGATTTTAGGCTTTCCATTTGTCTATGCTTTAGAAAGAATGGTTACCGTTATGGTCATTGC
TTGTCCACACGCATTGGGTCTTGCCATTCCCCTTGTGGTTGCGATTTCTACGGCAGTATCTGCTCAAAATGGATTGCTTA
TCCGAAATAGAACTGCTTTTGAAGAGTCAAGAAAAATTTCAGCTTTGCTTTTTGATAAAACAGGAACACTAACCAAAGGT
GATTTTGGTGTCACTCGAATCGAATCTGTTAAAGAAGCTTATTCAACAGAGGAAATTTTAAGACTTTCAAGTGCATTGGA
ACAAAGCTCAGAACACCCCATTGCAGTTGGTATTATTAAAAGAGTTAAAGAAGATAACATTACTATTCCAAAACCTGAAA
ACTTTAATGCAATTACAGGAAAAGGTGTAGAGGCAAATGTAGATGGTAAACAAGTGAAGGTGGTCAGCCCTGGTTATTTA
AGGGATGAAAAAATCACTATTCCTGAAGATGCTTATAGTGACGCTGCTGAAACTGTTGTATTTGTATTAATAGATGGCCA
GCTAGCAGGATACATTGCTCTTGCTGATGAAATAAGACCTGAATCTGCGGAAGCTATAAAAATATTCAAAAAAAACAATA
TTAAAGTCTTGATGGCAACTGGCGATAATGAAAAAACCGCTAAGGCTGTGAGTGAAAAACTTGGATTGGATGGTTACTAC
GCCGAAGTATTGCCACATCAAAAAGTTGAAATTGTAGAAGAGTTACAGAACAAAGGCGAATTTGTAGCGATGACGGGTGA
TGGTGTAAATGATGCGCCCGCACTTGCCAAAGCTGATGTGGGAATTGCAGTTGGTTCAGGTACGGACGTTGCCGCCGAAA
CAGCAGATATCATTCTGGTCAACAGTAACCCACAGGATATTGCCAACTTAATTCTCTTTGGAAAAGCCACCTACAATAAA
ATGATTCAGAATTTGATTTGGGCTACAGGATATAATGTAGTGGCTATTCCTTTAGCAGCCGGTGTATTATATTCTTCAGG
CTTTGTTTTAGGACCAGCTGTAGGAGCGGTATTTATGAGTTTAAGTACGATTATAGTGGCCATTAATGCGCAACTATTAA
AGCGAAAAATCGGTAAAAAATAA

Protein sequence :
MENHEHHNHEEMDHSKMDHSKMKHKKEDHSKMNHKGGDHSGHNPGHGQMGHDHHKMMIADFRKRFWVTLVLTIPILFFSP
MIQEFFGYEFLLPGNPYILFALSTIVYFYGGWPFLKGFWSEVKKGAPGMMTLISMAISVAYFYSTATVFGLRGEDFFWEL
STLIAIMLLGHWIEMKSVLGASKALQLLVSMMPAEAHRVKGDTIEDIPLEDLLKDDVILVKPGEKVPADGIIVDGSSYLN
ESMLTGESKPVKKDENDKVIGGSVNGNSTLKVKVEHTGKDSFLNKVIKMVEEAQKTKSKMQNLSDRAAKWLTYIALAIGF
GTLAVWLILGFPFVYALERMVTVMVIACPHALGLAIPLVVAISTAVSAQNGLLIRNRTAFEESRKISALLFDKTGTLTKG
DFGVTRIESVKEAYSTEEILRLSSALEQSSEHPIAVGIIKRVKEDNITIPKPENFNAITGKGVEANVDGKQVKVVSPGYL
RDEKITIPEDAYSDAAETVVFVLIDGQLAGYIALADEIRPESAEAIKIFKKNNIKVLMATGDNEKTAKAVSEKLGLDGYY
AEVLPHQKVEIVEELQNKGEFVAMTGDGVNDAPALAKADVGIAVGSGTDVAAETADIILVNSNPQDIANLILFGKATYNK
MIQNLIWATGYNVVAIPLAAGVLYSSGFVLGPAVGAVFMSLSTIIVAINAQLLKRKIGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 9e-101 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_3170 YP_007225412.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0629 Protein 0.0 59
Echvi_3170 YP_007225412.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0079 Protein 1e-148 48
Echvi_3170 YP_007225412.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0383 Protein 1e-121 44