Gene Information

Name : Echvi_0267 (Echvi_0267)
Accession : YP_007222572.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 273712 - 274269 bp
Length : 558 bp
Strand : -
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG

DNA sequence :
ATGGCAGAACATAAATGGTATGTACTCAGAGTGGTAGCTGGGCAAGAGAAGAAGGCCAAATCATATTTGGACAACGAGAT
TACCCGGCAAAAACTGGAGGATTATATTCCCGAGGTATTGATACCTTCTGAAAAAGTATATGAAATGCGCAATGGCAAAA
AGCGAGTCAGAGAGAGAAACTTCTTTCCTGGCTATGTTTTGGTTAATGCGGATTTGTCCCATGGTGAAGCCAATCACGTA
ATCACGAGTATCCCGGGTGTCATCGGGTTTCTAGGTGCAAACGCAGGAGGAGCTTCCAAAACTCCTGAGCCATTACGACA
ATCAGAGATCAACCGTATCTTAGGTAGGGTTGAAGGGATTGATGAGTTTGCCGAGAAGCTTGATACGCCATATATAGTCG
GAGAGACCATAAAAGTAATGGATGGTCCCTTTAGTGGTTTCTCGGGAACGATAGAAGAGGTGTTTGAGGATAAGAAAAAG
CTTAATGTTATGGTTAAGATTTTCGGCCGAAACACCCCTGTTGAGTTAAACTTTATGCAAGTAGAAAAACAAGACTAG

Protein sequence :
MAEHKWYVLRVVAGQEKKAKSYLDNEITRQKLEDYIPEVLIPSEKVYEMRNGKKRVRERNFFPGYVLVNADLSHGEANHV
ITSIPGVIGFLGANAGGASKTPEPLRQSEINRILGRVEGIDEFAEKLDTPYIVGETIKVMDGPFSGFSGTIEEVFEDKKK
LNVMVKIFGRNTPVELNFMQVEKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-31 42
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-31 42