Gene Information

Name : Echvi_2439 (Echvi_2439)
Accession : YP_007224696.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2893562 - 2895568 bp
Length : 2007 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-transloc

DNA sequence :
ATGACACAAGAAAACCACCATCAATCAGCACATGACCACCATGACCAGCATGATCATGGTGGACACCATGCCCATATGCT
TCAGGATTTTAAAAGAAGGTTTTGGGTTTCCATTATTTTGACGGTTCCCGTCCTGCTTCTTTCTAAGATGATCCAGGAGT
GGATTGGGATGGAATGGACCTTTCCTGGTGATAAATATATTCTTTTCGGGCTGTCGACAGCCATATATTTTTATGGAGGA
TGGCCATTTCTGAAAGGATTAAAGGAAGAGCTTGAAGAGGGCAAACCGGCCATGATGACCTTGATAGCTTTAGCCATTAC
CGTTGCCTATGGTTATAGCTCAGCAGTGGTATTTGGGCTGGATGGCAAGGGGTTTTTCTGGGAGCTTGCCACCTTGATCG
ATTTGATGCTCATAGGGCATTGGATCGAGATGAAATCAGTGATGAATGCCTCCGGTGCATTGGACGAGTTGGCTAAGCTC
ATGCCTTCGACCGCTCATAAATTCAAAGAGGATGGGGATACGGAAGAGGTAAAGATAGCCGATTTGCAGCAAGGCGATGA
AGTGCTGATCAAGCCAGGAGAGAAAGTCCCTGCTGATGGTGTGGTGGTAGATGGCAGTAGTTATGTCAATGAGTCCATGT
TGACAGGAGAGTCCAAACCTGTTAAGAAAGGCAAAGGTGATGAATTGGTAGGAGGAGCGATCAATGAACAGGGATCCTTA
AGAATAGCGGTCAAAAAAGTGGGTGAGGAGGCCTACCTTTCCCGGGTAATCGACATGGTGAAATCTGCACAGGACACCAA
GTCTAAGACTCAAAATTTAGCCAATAAAGCAGCAGGTTGGCTGTTTTATATTTCGATAGGAGCAGGAGCCATCACCATGG
GCGTGTGGTTGGTGTTGGGGAAGGAATTTGATTTTGCCCTGGAGCGGATGGTGACAGTGATGATCATTGCCTGTCCTCAT
GCACTTGGACTTGCCATACCACTTGTTACGGCTATTTCCACATCGGTTGCGGCTAAAAATGGTCTCTTGATAAGAAACCG
GACGGCATTTGAGCAATCTGGAAAAGTGACCATGGTAATATTTGACAAGACGGGTACCTTGACCGCTGGTGATTTTGGTG
TCAAGGAATGCAAAAGTATACATGAAGGTTATTCGGATGAGGAAATCCTAAGGTATACGGCATCTATTGAGCATCATTCC
GAACATCCCATTGCCAATGGCATCATGAAGAAGGTAAACGAAGAGGAACTCGATTATCCATCAGCGAAGGATTATGAAAA
CATCACAGGAGAAGGAGTAAAGGCAAAAGTGGAAGGAAAAAAGGTGATGGTGGTAAGCCCAGGGTATTTGAAAAAGCAGG
GAATAGAGGTTTCCGAGGATATTAAGGAAGAAGGAGTGGAGACATTGGTCTTTTTGGTAGTAGAAAATAAGGCTGTAGGA
TATGTGAAATTGGCAGATAGTGTGCGTAAATCCTCCCAAAAAGCCGTTTCTACCCTTCAAAATGATGGAGTGAAAGTAAT
CATGGCCACAGGTGATAACGAGTCGGCCGCGAAAGCGGTGAGTGATGAATTGGGGCTGGATGGTTATCATGCCGAGGTTT
TGCCAGAGGACAAACAAAGCATCGTTCAGTCAGCACAAAAAAAAGGAGAAGTGGTCTTGATGACTGGTGATGGAGTGAAT
GATGCTCCTGCATTGGCCGCGGCAGCTATAGGGGTAGCGATAGGTTCTGGGACGGACGTGGCGGCAGAGACGGCTGATAT
TGTGTTGGTAAACAGCGATCCGATGGATTTGTCTGCGATGATTCGTTTTGGGGAGGCCACTTATCAGAAAATGCGTCAAA
ACCTGTTTTGGGCCACCGCTTACAATGCCATAGCATTACCGCTGGCCACTGGCTTTGTTCCAAAACTGGTGATCAGTCCT
GCCTTGGGAGCGGTACTGATGAGTCTAAGTACCATTGTAGTGGCCATAAATGCGCAGCTTCTAAGAAAGAAACTGCACAA
GGATTGA

Protein sequence :
MTQENHHQSAHDHHDQHDHGGHHAHMLQDFKRRFWVSIILTVPVLLLSKMIQEWIGMEWTFPGDKYILFGLSTAIYFYGG
WPFLKGLKEELEEGKPAMMTLIALAITVAYGYSSAVVFGLDGKGFFWELATLIDLMLIGHWIEMKSVMNASGALDELAKL
MPSTAHKFKEDGDTEEVKIADLQQGDEVLIKPGEKVPADGVVVDGSSYVNESMLTGESKPVKKGKGDELVGGAINEQGSL
RIAVKKVGEEAYLSRVIDMVKSAQDTKSKTQNLANKAAGWLFYISIGAGAITMGVWLVLGKEFDFALERMVTVMIIACPH
ALGLAIPLVTAISTSVAAKNGLLIRNRTAFEQSGKVTMVIFDKTGTLTAGDFGVKECKSIHEGYSDEEILRYTASIEHHS
EHPIANGIMKKVNEEELDYPSAKDYENITGEGVKAKVEGKKVMVVSPGYLKKQGIEVSEDIKEEGVETLVFLVVENKAVG
YVKLADSVRKSSQKAVSTLQNDGVKVIMATGDNESAAKAVSDELGLDGYHAEVLPEDKQSIVQSAQKKGEVVLMTGDGVN
DAPALAAAAIGVAIGSGTDVAAETADIVLVNSDPMDLSAMIRFGEATYQKMRQNLFWATAYNAIALPLATGFVPKLVISP
ALGAVLMSLSTIVVAINAQLLRKKLHKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-95 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_2439 YP_007224696.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0629 Protein 8e-154 56
Echvi_2439 YP_007224696.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0079 Protein 5e-126 47