Gene Information

Name : Echvi_2317 (Echvi_2317)
Accession : YP_007224575.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2751142 - 2752578 bp
Length : 1437 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence : 
ATGAACTTATCCATCGCGAATAAGAAAACCAAGATTTTGGCCACTGTTGGTCCGGCTTCTAATAACGAAAAGACGCTTAC
CGAGCTGGTAAAGGCCGGAGTAAATGTGTTTAGGCTGAATTTTTCCCATGGAAACCATGAAGTGCACGCAGAAGTGATCA
AACTGATCCGTAAAATCAACAAGGATTACGGATGGAACGTGGGAATTTTGCAAGATTTGCAAGGCCCTAAGATCCGAGTA
GGTGAAGTAGAGAACAATGGCGTGGAGATCAAAGAAGGTGATCCGATAACCATTACAAATGAGCCAGTAGTGGGGACACC
ATCACTCGTGAGCACGGTGTACCAAAACCTTCCCCGTGATGTGGTCCCCGGTGACAGAATCCTGATTGATGATGGTAATT
TAGAGGTGTCCGTTAACAGCACCGACGGCAAAAATGTTAATTGTACGGTGGTGCATGGTGGTATTCTGAAGTCCAGAAAA
GGCATCAACCTTCCCAATACCAAGGTGAGTGCGCCTTCCCTGACAGAAAAGGACGTGGAAGACTTGGCTTTTGGTTTGGA
TAATGAGGTGGATTGGATTGCCCTTTCATTCGTGCGTTCTGCCGAGGACATCATTGACCTAAAAAAGAGAATTGAAGCTA
AAGGGAAGGGATGTAAGATCGTCGCAAAGATCGAAAAACCTGAAGCCCTGGATAATATCGATGAAATCATCGAAGTGACC
GATGGTGTCATGGTGGCACGTGGAGACCTAGGGGTGGAAGTGCCCATGGAAATGGTGCCGTTATGGCAAAAAAGAATCGT
TGAAAAATGCAAGCAAGCCAGTAAGCCGGTAATTATCGCCACGCAAATGCTGGAGAGCATGATCCAAAATCCGCGTCCTA
CCCGTGCCGAGACCAATGATGTAGCCAATGCCGTATTGGACGGTTCAGACGCCGTAATGCTGTCTGCTGAAACAGCTTCA
GGGGCTTATCCTGTTCATGCTGTGGAAGCCATGACCAAAGTAATCCAGTATGTAGAAAAGAATTCGGATGTTTACCATTA
CCTATACGACATCCCAGAGTCAAGCGAATATTTCGTGAGCAACAATGTCATCATGATGGCTTCAGGGCTGTCTAAAAATG
TAAACGCAAAGGCCATTGTGGGCATTACTGCATCAGGCTTTACTGCTTTCCGAATCGCTTCTCATCGGCCATTTGCCAAA
AACTTTGTCTTTACCCACAATAAGACCTTGATCACACAGTTGAGCTTGGTATGGGGCGTGACGGCTTATTTCTTCGAGGG
CAAGCAAGTATCTACCGATGATACCATTACCTTTATCCAAGACACGTTGAAGGAAAAAGGTCATCTGAAAGTCGGTGATA
TCATGATCAATACGGCAAGTATGCCGCTCCAAAATAAAGGAAAGACCAATATGTTGAAAATCCACATGGTGGAATAG

Protein sequence : 
MNLSIANKKTKILATVGPASNNEKTLTELVKAGVNVFRLNFSHGNHEVHAEVIKLIRKINKDYGWNVGILQDLQGPKIRV
GEVENNGVEIKEGDPITITNEPVVGTPSLVSTVYQNLPRDVVPGDRILIDDGNLEVSVNSTDGKNVNCTVVHGGILKSRK
GINLPNTKVSAPSLTEKDVEDLAFGLDNEVDWIALSFVRSAEDIIDLKKRIEAKGKGCKIVAKIEKPEALDNIDEIIEVT
DGVMVARGDLGVEVPMEMVPLWQKRIVEKCKQASKPVIIATQMLESMIQNPRPTRAETNDVANAVLDGSDAVMLSAETAS
GAYPVHAVEAMTKVIQYVEKNSDVYHYLYDIPESSEYFVSNNVIMMASGLSKNVNAKAIVGITASGFTAFRIASHRPFAK
NFVFTHNKTLITQLSLVWGVTAYFFEGKQVSTDDTITFIQDTLKEKGHLKVGDIMINTASMPLQNKGKTNMLKIHMVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-71 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-71 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-72 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-71 46
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_2317 YP_007224575.1 pyruvate kinase VFG0479 Protein 4e-72 46