Gene Information

Name : Echvi_2080 (Echvi_2080)
Accession : YP_007224342.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2453394 - 2454539 bp
Length : 1146 bp
Strand : +
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAAATTCGGAACAAAAGTCATCCATGCTGGGGTAGCGCCAGACCCTACCACTGGAGCCATCATGACCCCTATTTTTCA
AACCTCCACCTATGTGCAAAAGTCTCCCGGACAGCATAAGGGATTTGAGTATTCGAGAACGCACAATCCGACCCGTGATG
CGCTTCAGAAGAGCATTGCCGCACTGGAGAATGGAAAACACGGGCTTTGTTTTTCCTCAGGAATGGGAGCCATCGATGCT
TTGATCAAATTGCTCAGCCCCGGGGATGAGGTGATCAGTACCAATGACCTGTATGGCGGCACTTACCGGATATTTACCAA
GGTTTTTGCCAAATACGGCATCAAGTTTCATTTCGTGTCGATGGATGACCCCGCTTCCATTGAAAAGTACATCAATGATA
AAACCCGCTTGATTTGGGCAGAGACGCCTACCAATCCGATGATGAATATCATCGACATCAAGGCACTGGCAGCCATTGCC
GGGAAGCATGACCTGCTATTGGGAGTGGACAATACCTTTGCGACACCCTATTTGCAAAACCCACTGGATTTGGGAGCCGA
CTTGGTGATGCATTCGGTGACCAAGTACCTGGCAGGACACTCGGATGTGGTGATGGGGGCCTTGGTGGTCAATGATGACC
GATTGGCAGAAGACCTGGCCTTTATCCAGAATTCCTGCGGTGCCACTCCTGGTCCCCAAGACTGCTTTTTGGTGCTGAGA
GGGATCAAAACCCTGCATTTAAGGATGGAGCGTCATTGCCAAAATGGAAAAACCATCGCAGGGTACTTGCGGCATCATCC
CAAAGTGGACAAGGTGTATTGGCCAGGATTTGAGGATCATCCCAATCACGACATTGCAGCCAAGCAAATGCGGGATTTTG
GAGGAATGATCAGCTTTTCCATTGTCGGAGATAAGCAGGAAGATGCCAAGAAGGTGCTGGAAAATCTTCACTATTTTTCC
CTTGCCGAATCTTTGGGAGGGGTAGAGTCCCTTTGTGGTCACCCCGCTTCCATGACCCATGCCAGCATTCCTAAAGTAGA
AAGGGAAAAAGTTGGCTTGACGGATTCCTTGATTCGGTTGAGTGTTGGGGTGGAAGATGCTGAAGACCTGAAAAATGACT
TGGCTGCTGCATTGGAGTTGATTTAA

Protein sequence :
MKFGTKVIHAGVAPDPTTGAIMTPIFQTSTYVQKSPGQHKGFEYSRTHNPTRDALQKSIAALENGKHGLCFSSGMGAIDA
LIKLLSPGDEVISTNDLYGGTYRIFTKVFAKYGIKFHFVSMDDPASIEKYINDKTRLIWAETPTNPMMNIIDIKALAAIA
GKHDLLLGVDNTFATPYLQNPLDLGADLVMHSVTKYLAGHSDVVMGALVVNDDRLAEDLAFIQNSCGATPGPQDCFLVLR
GIKTLHLRMERHCQNGKTIAGYLRHHPKVDKVYWPGFEDHPNHDIAAKQMRDFGGMISFSIVGDKQEDAKKVLENLHYFS
LAESLGGVESLCGHPASMTHASIPKVEREKVGLTDSLIRLSVGVEDAEDLKNDLAAALELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-91 53
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-90 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_2080 YP_007224342.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 4e-69 43