Gene Information

Name : Echvi_0165 (Echvi_0165)
Accession : YP_007222472.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 168377 - 169345 bp
Length : 969 bp
Strand : -
Note : PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein

DNA sequence :
TTGAATATAATAAAAAATATTAGAAACAGCGCCATTAAAGTCCTCCAAACAGAGGCTGAAGCCCTTCAAAATCTGATCCC
AAAAATTGACGGTGACTTTGAAGCCTGTGTGGAAGAAATCCTCCATTCCAAAGGACGGGTGGTGATTACCGGGGTGGGCA
AGAGTGCCATTGTCGCCACCAAAATAGTGGCCACCTTAAATTCTACGGGTACTCCAGCACTTTTTATGCATGCCGCAGAT
GCTATTCATGGTGATTTAGGTATGATTCAAAAGGAAGATTTTGTACTTTGTATCTCCAAGAGTGGGAATACACCGGAAGT
GAAAGTCCTCGTGCCCATGCTCAAGAGAATGGGGTCGCGGTTGGTGGCCTTGGTAAGTAATACGGATAGCTATCTGGCCG
AACATGCCGATTTTGTGTTGAATGCCACCATTGCCGCAGAGGCTTGTCCTTTAAATTTAGCACCAACAACGAGTACCACC
GCGCACATGGCCATGGGAGATGCATTGGCCGTTTGCCTTTTGGAAGCCCGCGGATTTAGTAGCGATGATTTTGCACGCTA
TCATCCAGGGGGAGCTCTCGGGAAACAACTGTACCTTACCGTGGATGACCTGATGGTGAAGGATGCGGTTCCAGTGGTCC
ATGAAAGTGCTGCGCTCACAGAAGTAATCTTGGAAATCAGTGGAAAGCGACTTGGCGCCACTGCCGTCGTGGATTCCAGT
AGGAAGCTCATGGGCATTGTGACCGATGGGGACCTCCGAAGGATGCTGGAAAATCACCAGGATTTATCTAAATTAACAGC
TAAAGATATTATGACCATAAACCCAAAGACCATCGTGCGCAATGAATATGCGGTGAGGGCGTTGAATCGCATGAGGGAGT
ATAACATCACGCAATTGGTCGTGGCAGAAGAGGGAGAGGTGTTTGGATTTATCCATATCCATGACTTAATGAAAGAGGGG
ATTGTTTAA

Protein sequence :
MNIIKNIRNSAIKVLQTEAEALQNLIPKIDGDFEACVEEILHSKGRVVITGVGKSAIVATKIVATLNSTGTPALFMHAAD
AIHGDLGMIQKEDFVLCISKSGNTPEVKVLVPMLKRMGSRLVALVSNTDSYLAEHADFVLNATIAAEACPLNLAPTTSTT
AHMAMGDALAVCLLEARGFSSDDFARYHPGGALGKQLYLTVDDLMVKDAVPVVHESAALTEVILEISGKRLGATAVVDSS
RKLMGIVTDGDLRRMLENHQDLSKLTAKDIMTINPKTIVRNEYAVRALNRMREYNITQLVVAEEGEVFGFIHIHDLMKEG
IV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-51 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-51 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 3e-51 44