Gene Information

Name : Echvi_1582 (Echvi_1582)
Accession : YP_007223857.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1818920 - 1819597 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGACATACTTTCTATAGAAAATGTAAGTAAAATATACCAAAGCGGTTCAAGGACACTCACGGTCTTGGAGGACATCAA
CCTAAGCGTAAAGGCTGGAGACAGTATCGCAATCGTCGGGCCTTCTGGTAGTGGGAAAACCACTTTATTGGGCCTTTGCG
CTGGGCTTGACAGTGCCTCCTCGGGTAGTGTAGCGCTGAACGGGCACCGACTGGAAGGACTCTCCGAGGATCAAAGAGCG
GCTGTCCGGAGCCAAGAAATTGGTTTTATATTCCAAAATTTTCAACTATTACCTACTCTGACGGCATTGGAAAATGTGAT
GGTGCCCTTGGAGCTAAAAAAGCGGAAAGATGCCAAACAAAAGGCCACTGAGCTGCTTCAGCAAGTAGGCTTGGGCGATC
GTATGACCCATTATCCCACACAGCTTTCTGGAGGGGAGCAGCAGCGGGTGTCGATAGCCAGGGCTTTTGCAAACGAGCCT
AAGATTCTCTTTGCAGATGAGCCTACCGGCAACTTGGATACAGAAACCGGAGAGCTGATCGAAACCTTAATATTTGACCT
GAACAAGGCGCTTGGAACCACTTTGATCTTGGTGACGCATGATACGGACCTGGCAGCCAAGACCAACAGAATCATCCATA
TTAAAGGAGGTAAAATACAAGAGGAGCAACATGCATAG

Protein sequence : 
MDILSIENVSKIYQSGSRTLTVLEDINLSVKAGDSIAIVGPSGSGKTTLLGLCAGLDSASSGSVALNGHRLEGLSEDQRA
AVRSQEIGFIFQNFQLLPTLTALENVMVPLELKKRKDAKQKATELLQQVGLGDRMTHYPTQLSGGEQQRVSIARAFANEP
KILFADEPTGNLDTETGELIETLIFDLNKALGTTLILVTHDTDLAAKTNRIIHIKGGKIQEEQHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_1582 YP_007223857.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-43 48
Echvi_1582 YP_007223857.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-34 41