Gene Information

Name : Echvi_1247 (Echvi_1247)
Accession : YP_007223528.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1434287 - 1434760 bp
Length : 474 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGGCCGGTGTAAACAAAGTAATTTTAGTTGGCAACCTCGGAAGAGACCCTGAAGTGAGGCATTTGGAAAGTGGCAGTGT
GGTGGCCAATGTGACACTAGCAACAACAGAAGCCTATAAAGACCGAAACGGAAATCGCGTAGAAAATACCGAATGGCATG
ACCTTGAAATGTGGGACGGCCAAGCCAAAGTAGCGGAACAGTACCTGAGAAAAGGCAGCCAGATTTTCGTAGAAGGAAAA
ATCAAATCAGACACTTGGCAAGACGAACAAGGGAATAACCGTAAAAAAGTCAGGATCCGGGTGCTGAGCTTTACCATGCT
GGGCTCTAGAAATATGGACGGAGGGGCTCCTGGTGGCAATTCCAGCAATGCTGGACAGGCTGACCAATCCACGCCCAATA
AGGCCCAACCTGCTGCCTCCATGCCATCATCTGGAGGTAATATCGATGACGGAGAGGATGATTTGCCATTCTAA

Protein sequence :
MAGVNKVILVGNLGRDPEVRHLESGSVVANVTLATTEAYKDRNGNRVENTEWHDLEMWDGQAKVAEQYLRKGSQIFVEGK
IKSDTWQDEQGNNRKKVRIRVLSFTMLGSRNMDGGAPGGNSSNAGQADQSTPNKAQPAASMPSSGGNIDDGEDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-20 42