Gene Information

Name : Echvi_1003 (Echvi_1003)
Accession : YP_007223284.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1161784 - 1162827 bp
Length : 1044 bp
Strand : +
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
ATGAGTACCGGTAAAAAGCTGAGTTTTCTGGACAAAAACCTTACCCTATGGATCTTTGTGGCCATGGTAATCGGAGTAGG
CATTGGCTTTTATTTTCCCTCATTTCCTGAAAAGGTACAATCCCTGAGCCATGGAAGCACCAATATTCCTATAGCCATAG
GACTGATCCTGATGATGTATCCGCCATTGGCCAAGGTAAATTACTCCTTGCTGCCCAAGGTCTTCCAAAACACCAAAATC
CTATCGATCTCCCTTCTCCTAAACTGGATCATCGGTCCTGTTTTGATGTTCTTTCTTGCCATCTTTTTCTTGCGGGACTA
TCCTGAATACATGGTTGGTTTGATCCTCATTGGATTGGCGCGGTGCATTGCGATGGTGTTGGTCTGGAATGATCTGGCAG
AGGGGAGCAGTGAGTACGGTGCTGGATTGGTCGCGCTGAACAGCATTTTCCAAGTCTTTTTTTACAGCTTTTATGCATGG
CTGTTTATTACCGTCCTGCCGCCATATTTTGGTTTTGACGGTGTCTTGGTGGATATTTCTATCCAGACCATTGCAGAGAG
TGTGGCCATTTATCTTGGAATTCCCTTTTTAATGGGAATTTTGAGCCGTTACTTTCTGATCCGAGCAAAGGGAGAAGAAT
GGTACACGCATGCGTTTATACCGGCCATCTCACCGATGACCCTGGTGGCCTTGCTGTTTACCATCATCGTGATGTTCTCG
CTAAAGGGTGAACTCATCATGGAACTTCCCGGAGATGTCGTCGTCATCGCTATTCCACTGTTAGTTTACTTCACTTTGAT
GTTTATCATCGGTTTCTTTGTCACCAAGGCTATGGGAGCCAGTTATGACAAGACGGCCGCAGTGGCCTTTACCGCAGCAG
GAAATAACTTCGAGCTGGCCATTGCGGTGGCCATTGCAGTTTTTGGGCTGAATTCAGGACAGGCCTTTACGGGCGTTATC
GGCCCATTGATAGAAGTGCCGGCGTTGATCCTGCTCGTAAGGGTCGCATTCTGGCTACGTAAAAAGTATTATTCTTTCAA
GTGA

Protein sequence :
MSTGKKLSFLDKNLTLWIFVAMVIGVGIGFYFPSFPEKVQSLSHGSTNIPIAIGLILMMYPPLAKVNYSLLPKVFQNTKI
LSISLLLNWIIGPVLMFFLAIFFLRDYPEYMVGLILIGLARCIAMVLVWNDLAEGSSEYGAGLVALNSIFQVFFYSFYAW
LFITVLPPYFGFDGVLVDISIQTIAESVAIYLGIPFLMGILSRYFLIRAKGEEWYTHAFIPAISPMTLVALLFTIIVMFS
LKGELIMELPGDVVVIAIPLLVYFTLMFIIGFFVTKAMGASYDKTAAVAFTAAGNNFELAIAVAIAVFGLNSGQAFTGVI
GPLIEVPALILLVRVAFWLRKKYYSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-78 62
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 7e-101 62
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 5e-101 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Echvi_1003 YP_007223284.1 arsenical-resistance protein BAC0573 Protein 2e-100 61
Echvi_1003 YP_007223284.1 arsenical-resistance protein BAC0004 Protein 1e-69 50