Gene Information

Name : Desdi_0962 (Desdi_0962)
Accession : YP_007219877.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.-.-
Position : 1006737 - 1007318 bp
Length : 582 bp
Strand : +
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
ATGCCCCAAGAAAACAAACAAAAAAAATACGGCATGGTAATTGATTTGAGAAAATGTGTCGGATGTATGTCTTGTTCGGT
ATCCTGTAAAATGGAGAATGGAGTCTCTTTTGGTGTTTTTAGGTCCTGGGTAAACATGACTGAAAAAGGTGATTTTCCAA
ATGTAAAGAGATATTATCAGCCAAGGCTTTGTAATCATTGTGAAAATGCTCCCTGCGTAGAGGTCTGTCCTGTTAAAGCT
TCTTATAAGCGTGAGGATGGCATCGTTCTAGTTGATAAGGAGAAATGCATTGGATGTGGTTACTGTGTAGTTTCCTGCCC
GTATGATGCTCGTTATATGAGTAAAACCCAAAAAGTTGCTGACAAATGTACCTTCTGTGATCATCGTGTAGATAATGGTG
GAGAACCAGCATGTGTGAAAAACTGTATGGGAAAGGCACGGATTTTTGGAGATCTAAATGACCCGAACAGCAAGATTTCA
CAGCTCATTTCCCTTAATGCTGTTCAAGTGATTAAACCGGAACAAGGAACAAAACCTCAAGTATTTTATATATCGGCTGA
TTTTAATCAACAGCCTAAGTAA

Protein sequence : 
MPQENKQKKYGMVIDLRKCVGCMSCSVSCKMENGVSFGVFRSWVNMTEKGDFPNVKRYYQPRLCNHCENAPCVEVCPVKA
SYKREDGIVLVDKEKCIGCGYCVVSCPYDARYMSKTQKVADKCTFCDHRVDNGGEPACVKNCMGKARIFGDLNDPNSKIS
QLISLNAVQVIKPEQGTKPQVFYISADFNQQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-49 51
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-49 51
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 4e-49 51
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 6e-49 51
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 6e-49 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_0962 YP_007219877.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 2e-49 51