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Name : Desdi_0009 (Desdi_0009) Accession : YP_007218983.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 9955 - 11220 bp Length : 1266 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain DNA sequence : ATGCTTGATCTAAAATTTGTACGCACAAACCCTGAGGTAGTAAAGGAAGCGCTCCAAAAAAGGAATTCAAATGTCAGCTT GGACGAGTTTTTAAACCAAGAAGAAGAACGACGTAAGCTTCTTTTTGATGTAGAAACTTTAAAGGCTAAACGCAATACAG TTTCTGAAGAAGTAGGACGGCGGAAAAAGAGCGGTGAGGATGCCGAACAGCTCATTTTAGAAATGCGGGAAGTTGGTCAA GATATCAAGAGTCTTGAGGAACAACTCACTAAAATAGAAAATGATATGGAAACCGTACTTTATGGTATTCCAAATATTCC CCATGCATCTGTGCCCGTGGGGACTGATGAATCATTCAATGTCCAAGTGCGTTCCTGGGGAACTCCAGGTCGTTTCGATT ATCAACCCTTGGCCCACTATGAGATTGGCGAGAATTTGGATATTCTGGATTTTGCAAGGGCGGGGAAGGTCACAGGAGCT CGCTTTACCTTTTATAAAGGATTAGGGGCCAGGCTGGAAAGATCTTTGATTAGTTTTATGCTAGATCGACATACCGCTAA AGGATATGTAGAAGTACTTCCTCCTTTTATGGTCCATCGTAACTCCATGATAGGTACCGGACAGCTTCCCAAATTTGAGG AAGATGCTTTTAAGGTGGCGGGTACGGAATATTTCTTAATTCCGACAGCAGAGGTGCCGGTAACCAATATGTACAGGGAA GAAATTCTGGAAGCAGATCAGCTGCCAATTCACCATTGTGCCTATAGCGCTTGTTTCCGGGCAGAAGCCGGGTCTGCAGG TAGGGACACTCGGGGTTTGATTCGTCAGCATCAATTCAACAAAGTAGAATTGGTGAAGTTTACTTTGCCAGACAATTCCT ATGAGGAGTTGGAAGCCTTAACCCGTGATGCTGAAAGTATCCTCCAGGAGCTAGAACTGCCATATCGTGTCATGGCGCTA TCCACAGGAGATATAGGTTTTAGTTCTGCTAAAACCTATGATTTAGAAGTATGGCTTCCCAGCTTCAATACATATCGGGA GATTTCATCTTGTAGTAATTTTGAAGATTTCCAAGCACGTCGTGCTAATATACGTTTCCGTCGAGCACCGAAAGCGAAGC CCGAGTACCTTCATACTCTCAATGGTAGCGGTTTAGCAATTGGCCGTACGGTATCAGCTATTCTTGAAAACTATCAAGAA GCTGATGGAAGAGTAAGAGTACCCAAAGTACTTCAGCCATATATGGGTGTAGAGTATATTGGCTAA Protein sequence : MLDLKFVRTNPEVVKEALQKRNSNVSLDEFLNQEEERRKLLFDVETLKAKRNTVSEEVGRRKKSGEDAEQLILEMREVGQ DIKSLEEQLTKIENDMETVLYGIPNIPHASVPVGTDESFNVQVRSWGTPGRFDYQPLAHYEIGENLDILDFARAGKVTGA RFTFYKGLGARLERSLISFMLDRHTAKGYVEVLPPFMVHRNSMIGTGQLPKFEEDAFKVAGTEYFLIPTAEVPVTNMYRE EILEADQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFTLPDNSYEELEALTRDAESILQELELPYRVMAL STGDIGFSSAKTYDLEVWLPSFNTYREISSCSNFEDFQARRANIRFRRAPKAKPEYLHTLNGSGLAIGRTVSAILENYQE ADGRVRVPKVLQPYMGVEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-123 | 60 |
