Gene Information

Name : Desdi_0746 (Desdi_0746)
Accession : YP_007219669.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Unknown
Product : DNA/RNA tunnel of bacterial DNA dependent RNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 773680 - 774096 bp
Length : 417 bp
Strand : +
Note : PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase

DNA sequence : 
ATGGATGATAAAAAAGATGTTTTAGATAATGGTCCTTTTTTTCATGGTACGAAAGCAGAACTAAAAATTGGAGATCTGCT
CGAGCCACAACACTTGTCAAATTACCAAGATAAAAAATCCAACTATATTTATTTTACTGCAACATTAAATGCTGCTAAAT
GGGGTGCTGAGTTAGCGACATCTCAATCAAAAGAAAGAATTTATATTGTAGAACCATTAGGTGAATTTGAAAATGACCCG
AACTTAACTGACAAAAGATTTCCTGGAAATCCAACTCGTTCTTACAGGTCGAAATCTCCTTTGAAAATTATCGCTGAATT
AGGTTCATGGGAAAGACATTCCCATGAAGAGATAAACCATATGCTTTCATCTTTAAAAAAGTTAAGTGATGAAGGAAAAA
ATGTAATATACGATTAA

Protein sequence : 
MDDKKDVLDNGPFFHGTKAELKIGDLLEPQHLSNYQDKKSNYIYFTATLNAAKWGAELATSQSKERIYIVEPLGEFENDP
NLTDKRFPGNPTRSYRSKSPLKIIAELGSWERHSHEEINHMLSSLKKLSDEGKNVIYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arr-2 CAJ77045.1 Rifampin ADP-ribosylating transferase Not tested AbaR1 Protein 1e-27 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_0746 YP_007219669.1 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase AF001493.1.orf0.gene Protein 1e-32 53
Desdi_0746 YP_007219669.1 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase NC_010410.6003052.p0 Protein 6e-28 52
Desdi_0746 YP_007219669.1 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase AL939114.1.orf1.gene Protein 3e-24 51
Desdi_0746 YP_007219669.1 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase FM897214.1.orf2.gene Protein 4e-30 50