Gene Information

Name : Desdi_0390 (Desdi_0390)
Accession : YP_007219332.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 416088 - 416768 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCTGAGGTCCTTCGGATGGAAAATATCTCAAAAAAGTACATGATGGGTGAGGAAGAATTAGAAGTTTTGCATAACGT
GAACTTAGTCGTGAACTCAGGGGAGTTTCTCTCGCTCCTTGGCCCCTCGGGGTCTGGGAAATCGACGATGATGAATATCA
TTGGCTGTCTGGATGTGCCGACCACAGGAAAGTATCTGCTTTCCGGCAATAATATTGACGATCTGGATGAAACCGAACTT
GCCTCTATACGAAATAAGGAAGTAGGCTTTGTATTTCAGAGTTTTCAACTCTTACCGAGGTTGAGTGCGCTGCAAAATGT
CGAGCTTCCGCTCATTTATGCTGGCCTCTCTGCATCTGAGCGTAAACAGAAGGCTATAAAAAAGCTTGAGCAGGTAGGAT
TAGCCGACAAGTTAAGAAATCTGCCGAATCAGCTCTCTGGTGGTCAGCAGCAGCGGGTAGCTATTGCGCGGGCACTGGTT
ACTGAGCCGACCCTTCTCCTTGCGGATGAACCGACAGGTGCCTTGGATCAAAAGACGGGAGCCCAAGTGATGGAGCTTTT
CGAAGAGCTTCATCATGAAGGAAGAACCATCATTATGATTACCCACGATATCGACATTGCCCGTCACGCCCAACGCGTAG
TCAATATTCTGGACGGATATCTAACCGAACAGGAGGGGTGA

Protein sequence : 
MAEVLRMENISKKYMMGEEELEVLHNVNLVVNSGEFLSLLGPSGSGKSTMMNIIGCLDVPTTGKYLLSGNNIDDLDETEL
ASIRNKEVGFVFQSFQLLPRLSALQNVELPLIYAGLSASERKQKAIKKLEQVGLADKLRNLPNQLSGGQQQRVAIARALV
TEPTLLLADEPTGALDQKTGAQVMELFEELHHEGRTIIMITHDIDIARHAQRVVNILDGYLTEQEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-25 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_0390 YP_007219332.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-46 56
Desdi_0390 YP_007219332.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-35 47
Desdi_0390 YP_007219332.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-31 45
Desdi_0390 YP_007219332.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-31 44
Desdi_0390 YP_007219332.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-26 41