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Name : Desdi_3238 (Desdi_3238) Accession : YP_007222028.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 3301504 - 3303336 bp Length : 1833 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : ATGGCTATTGACGCTGTGTTGGTGAATCTCGCAGCGTTTTTAAGCTTTTATATTCGTTTTGGCTTTGAGGGCAATGGCAA GATACCGGAAGAGTATCTCTTGACCCTGACCCATTCCGCCTGGACGGCCACCCTGGTCTACTTGGCGGTGTTCTATATCT TTGGCTTATACAACAAGCTCTGGCAATATGCCAGTATCGGCGAGCTCGTATCGATTATCTTTGCAGTGACGGTGGGAACG GCCGGAACAGTGGCCCTGGTGTATTTCCTTGCACCCTTGCGTTTTCCCCACTCTGTATCGGCGCTACTCTGGTTTACCAC CCTCTTTTTAATCGGAGGATCCCGGTTCATCTGGAGAATTTTCCAAGATAATATCTTTACCCAACATGTGCCCGGTTCCC AGAACCAAGTCCTGATTATCGGTGCCGGGGACGCTGGTGTCATGGCCGCCCGGGAGTTAAAAAACAAGAACTATCGGGAA GGTCGTCCGGTGGGCTATATCGACGATGCTGTCAGAAAGCAAAGACTACAGCTTATGGGGATCCCTGTCTTAGGGACTCG CAAGGACATTCCTCGAGTGGTCAAGAACCATAATATTGATAAGATTATTATTGCTATGCCTTCGGCCTCCGGAGAGGTTA TCCGGGAAATCGTGGGCATCTGTGAAAAGACCGGGGTGGATCTCAAAATTATGCCCGGAGTTTTCGATATGGTTAGCGGT CAATTAGATACCAACGAGATCCGTGAAGTTCAGGTCGAAGACTTATTGGGTCGTGAACCCGTTAGTGTGAATCTTGAAGA TGTCGCCGGCTATCTGACTGGAGAGGTGGTCCTTATCACCGGCGGTGGCGGCTCCATCGGCTCTGAGCTTTGTCGCCAAG TCGCCCGCTTTAACCCCGCCAAGCTAGTAGTGGTCGGGCATGGTGAGAATAGCGTCTTTGATATTGAACAAGAGCTTCGC GTTGATAACCCCACTCTTGATGTGGCCACTGAGATTTTGGATGTTAAGGACCGCGATAAGGTCCATATTGTCTTCCAACG TTACAAGCCCGGGGTGGTATTTCATGCGGCAGCCCATAAACATGTCCCGTTGATGGAAAAGAACCCGGAAGAAGCTTTAA AGAACAATGTGATGGGTACCAGCAACCTTACAGAAGCCGCGGATGAAGCGAAGGTTAAGACCTTCGTCCTGATTTCCACC GATAAGGCCGTCAACCCCACCAGTATCATGGGAACCACCAAACGGGTGGCCGAGATGGTTATTCAAAGCATGGACAAGCG TTCCGAGACCAAGTTTGTAGCGGTACGCTTTGGCAATGTGCTAGGCAGTCGCGGCAGTGTCATCCCCACCTTTAAACGAC AGATCGCCAAAGGGGGTCCGGTCACCGTGACCCACCCCGACATGGTGCGTTTCTTTATGACCATACCCGAGGCCTCCCAG TTGGTCATCCAAGCCGGCTCCATGGCTGAAGGGGGCGAGATTTTCATTCTCGACATGGGTCAGCCCGTGAAGATTTTGGA TTTGGCCCGCGATCTCATTAGCCTCTCGGGATTTGAGCCCGATGTGGATATTAAAATCAAGTTTACCGGGATGCGTCCCG GTGAGAAGCTCTATGAAGAACTCCTAACCGCTGAAGAAGGAACTTCCGCGACGAAACATAAACGGATTTTTGTAGCCAAA CCCAACAACATTAATGTTTCGCAGCTGGAGGAGCTCATTCACCTTATCCGGGAACGCGGCTCTTACCTTACACGGGAAGA AGTTATCGCTCAGTTACAATCCGTGGTGCCTACATTTAGAAAGCAAGCTTCCAAAGCAGTTGCCAATCAATAA Protein sequence : MAIDAVLVNLAAFLSFYIRFGFEGNGKIPEEYLLTLTHSAWTATLVYLAVFYIFGLYNKLWQYASIGELVSIIFAVTVGT AGTVALVYFLAPLRFPHSVSALLWFTTLFLIGGSRFIWRIFQDNIFTQHVPGSQNQVLIIGAGDAGVMAARELKNKNYRE GRPVGYIDDAVRKQRLQLMGIPVLGTRKDIPRVVKNHNIDKIIIAMPSASGEVIREIVGICEKTGVDLKIMPGVFDMVSG QLDTNEIREVQVEDLLGREPVSVNLEDVAGYLTGEVVLITGGGGSIGSELCRQVARFNPAKLVVVGHGENSVFDIEQELR VDNPTLDVATEILDVKDRDKVHIVFQRYKPGVVFHAAAHKHVPLMEKNPEEALKNNVMGTSNLTEAADEAKVKTFVLIST DKAVNPTSIMGTTKRVAEMVIQSMDKRSETKFVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRFFMTIPEASQ LVIQAGSMAEGGEIFILDMGQPVKILDLARDLISLSGFEPDVDIKIKFTGMRPGEKLYEELLTAEEGTSATKHKRIFVAK PNNINVSQLEELIHLIRERGSYLTREEVIAQLQSVVPTFRKQASKAVANQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-117 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-110 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desdi_3238 | YP_007222028.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 1e-114 | 47 |
| Desdi_3238 | YP_007222028.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 2e-87 | 44 |
