Gene Information

Name : Desdi_3180 (Desdi_3180)
Accession : YP_007221972.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3234487 - 3234849 bp
Length : 363 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence :
ATGTTCGGTGATCTCTCTAAGGCCGAGAAAATTTACATCGCCTGCGGGTATACTGACATGCGTAAGTCCATCGACGGACT
GGCAGCGCTGGTCCAGCAAAACCTTCAGCTTAACCCATTTCAAAACAGTTTGTTTCTCTTTTGTGGCCGTCGGCATGATC
GACTGAAAGCACTCTATTGGGAAGGCGATGGCTTTGTTCTTCTGTATAAGCGACTGGAAAAGAGCAAATTTCAATGGCCC
AGGAATGCTGAAGCGGTTCGCGGGATTACCCGCCAGGAATTCCGCTGGCTTATGGAAGGGCTGTCCATTGATCAACCCAA
GGCCGTGAAAAAGTGGGATTCCACAGGCTGTTTTTCGGTATAG

Protein sequence :
MFGDLSKAEKIYIACGYTDMRKSIDGLAALVQQNLQLNPFQNSLFLFCGRRHDRLKALYWEGDGFVLLYKRLEKSKFQWP
RNAEAVRGITRQEFRWLMEGLSIDQPKAVKKWDSTGCFSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 3e-13 46
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-11 43
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 7e-11 42
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 7e-11 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 8e-10 41
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 7e-11 41
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 8e-10 41
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_3180 YP_007221972.1 transposase VFG1737 Protein 2e-11 41
Desdi_3180 YP_007221972.1 transposase VFG1052 Protein 5e-10 41