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Name : Desdi_0311 (Desdi_0311) Accession : YP_007219255.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 331662 - 334844 bp Length : 3183 bp Strand : + Note : PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit DNA sequence : ATGTCGAAGAACTTCTGTGAGTCCCACTTAGAAGAAGCAACCCTAGAATGGTTCGAAGAGCTGGGCTATGAAATAGTTTT CGCTCCCGATATTGCACCAGATGGCGATTACCCGGAGCGAGGGGATTACGGCGACATCACTCTTAATGACAGACTAAAAG AAGCCCTCCAAAGGATCAATCCAAGGATGAGGCCAGATGCTCTGGAAGATGCCTTCAGGCAGATAACTATTCCCCAAAGT CCTAGCCTTATCATGAACAACAAGGCTTTTCAAAAGATGATCACCGACGGTATCGATGTGCAGGTGAAGCAAGCGGACGC CAGCTATCGAACGGAAAAGGTCTATGTATTTGATTTTGAGAAGCCGCTGAATAATGAGTTCATGGTAGCCAACCAGTTTA CATTTATCGAACATGGGGTCGAAAAGCGTCCAGATGTGATTGCCTTTGTTAACGGCATTCCCCTTGTAGTTATGGAATTA AAAAGTGCCAGTGATGAAAATGTGGATATCACAGATGCTTACAACCAGCTTCAGACCTATAAAATGACCATACCTTCGCT ATTCACCTATAATTCCTTCTTGGTAACCAGTGATGGGGTAAATGCTAGGGCGGGTACACTGACTTCTGATGAAGACCGTT TTATGGCCTGGCGAACTATTGATGGGGAGACGACAGCACCTTTATCGATTCCTCAACTTGAAGTGTTAATCAAGGGAATG TTCCAGCGTGACCGTTTCCTGGATATCATCAGGCATTTTGTGCTTTTCCAAAGCGATAGCCAGGACACCATAAAAATATT GGCTGGCTATCATCAGTACCATGCTGTAAATAAGGCGATCGAAAGCACGGAGCGAGCCACTCAGGAATCCGGGGATAGAA GAATCGGTGTTATTTGGCACACTCAAGGCAGCGGTAAAAGCCTGTCTATGGTTTTCTATGCAGGGAAACTTGTCATCAAC GAGGGACTTGAAAATCCGACCATTGTAATTATCACAGACAGAAATGACCTAGATGATCAATTGTTTGGTACCTTTTTAAA AAGCAAAGGCATTTTAAGAAGTACGCCGGTGCAAGCAACAGATAGAACTCATCTGAGAGACTTACTGAATAACCGTACCA GTGGCGGTATTATTTTCACGACCATACATAAATTCGCACCTGTAGCAAAGGAAGCAAAAGAAGAATGTGAGTTGGACAGG GCAGCCGAAGCTACTGCCCTCTACCGTACCGAAGATATGGTTCTCACCGATCGCAAGAATGTCATCGTCATGGCGGATGA AGCCCATCGCAGTCAGTATGGATTTGAAGCCGAGATCATGAAGGGTGATGATGAGGCTAATGTGAAGTATGGCTATGCTA AATACATGCGTGACAGTCTTCCCAACGCCTCCTATATAGGGTTCACCGGGACCCCGGTGGAATTGACCGATAAAAATACC CGAGCTGTGTTTGGGGATTACATCGATGTCTATGACATGACCCGAGCTGTTGAGGATGGAACTACGGTTAAGATTTTCTA CGAAAGCAGAATTGCCAAGCTGGAGCTGCCAGAAGAACTAAAACCAAAGGTTGATACTGAGTACGATGAAATCACTGAGT ATCAGGAATATACTCAAAAAGAAAAACTCAAGAGCAAATGGGCCAGACTTGAAGCAATCGTAGGCGCTAGTGAGCGTGTA AAACAGATTGCTAAAGATATTGTAGAGCATTTTGAAAAGCGGGAACAGGCTCAGGAAAATGCAGGTGGCAAAGCGATGAT CGTGGCCATGAGCAGGAGAATCGCCATTGATCTATATCAAGAAATTGTGACGATACGACCTGAATGGCATAGTGATGACT TGATGGCAGGAAAAATCAAAGTGGTTATGACCGGCGCATCATCCGACCCAGCGGAATGGCAGAAGTTTATCGGAAAGAAG GCCAGCAGGGAAACCTTAGCGAAGCGCATGAAGGATAAAAATGATGAGTTGAAACTGGTCATCGTCCGCGATATGTGGCT GACAGGCTTTGATGTACCAAGTATGCACACTATGTATATAGACAAGCCCATGCAGGGGCATAACTTGATGCAGGCTATTG CTAGGGTAAATCGTGTATTTAAAGAAAAACAAGGCGGGCTTATTGTTGACTACATTGGCATTGCTGAGAATCTGAAAGAA GCACTTGCCCAGTATACTGAAAGCGATAAGAAGACCACAGGGGTTGATACCGAAGTTGCAGGGCAGGAACTACTTATAAG GCATGATTTGATCAAAGAGTTGTTGCACGGACACGATTACAGCAAGTTCTTTACGGGCAAGCCTAGTGAAAAAATGCAAG CCATCGTGGAGACTATGGATTATATCATCGGCCTTCGTGAGGACAGGAAAAACGACTATATCAAACTGGTCACTGAAATG GCCAGAGCATATTCTCTGTGCGCCACAACTGATATTGCGGAAAGCCTCAATGTGGAGGTTGGCTTCCATAAAGCTGTTAA AGCAAGCCTAGTTAAAATGATTAGCAATGATAATAGAAAGAAAACAACGACTCAGCTAGACAGTGAGTTGAATCAGTTAA TATCAAAGTCGATCTCATCTAATGAAGTCATCGATATTTTAAGTTCAGTGGGACTTTCCAAGCCCAATATTGCCATTCTT TCTGAAGAGTTTCTTGAGGAAGTAAAGGGAATGAAACAGAAGAACTTGGCTGTTGAGCTCTTGAACAGACTGCTTAAGGG CGGAATAAAGACCTTCTCAAGGCGTAACCTTGTCCAGTCCAAGAAATTCTCTGAATTACTGGATGCTGCGATCAGAAAAT ATCAGAACAGAGCTATTGAAACCACCCAAGTCATCATGGAGCTCATCGAACTTGCTAAGCAGATTAGTGAGGCAGAGAAA CGCGGTGAAAGCACTGGCTTAACTCCTGATGAATTGGCGTTTTATGATGCCTTAGCAGACAATGATTCTGCAAGAGAGAT AATGGGCGATGAGATTCTGAAGCAAATTGCTAGAGATCTAACCCAGTCTATAAAGAAAAATATCAGCGTGGACTGGGCCA TCCGTGAGAGTGTTCAGGCTAAGATGAAGATGACCATCAAGCGACTTTTGAAGAAATATGGGTACCCGCCGGATAAGACT GCCAAAGCAGTGGACATCGTAATGGAGCAGACCAAGTTAATGTGTCAGAACGAGAGTAGATAA Protein sequence : MSKNFCESHLEEATLEWFEELGYEIVFAPDIAPDGDYPERGDYGDITLNDRLKEALQRINPRMRPDALEDAFRQITIPQS PSLIMNNKAFQKMITDGIDVQVKQADASYRTEKVYVFDFEKPLNNEFMVANQFTFIEHGVEKRPDVIAFVNGIPLVVMEL KSASDENVDITDAYNQLQTYKMTIPSLFTYNSFLVTSDGVNARAGTLTSDEDRFMAWRTIDGETTAPLSIPQLEVLIKGM FQRDRFLDIIRHFVLFQSDSQDTIKILAGYHQYHAVNKAIESTERATQESGDRRIGVIWHTQGSGKSLSMVFYAGKLVIN EGLENPTIVIITDRNDLDDQLFGTFLKSKGILRSTPVQATDRTHLRDLLNNRTSGGIIFTTIHKFAPVAKEAKEECELDR AAEATALYRTEDMVLTDRKNVIVMADEAHRSQYGFEAEIMKGDDEANVKYGYAKYMRDSLPNASYIGFTGTPVELTDKNT RAVFGDYIDVYDMTRAVEDGTTVKIFYESRIAKLELPEELKPKVDTEYDEITEYQEYTQKEKLKSKWARLEAIVGASERV KQIAKDIVEHFEKREQAQENAGGKAMIVAMSRRIAIDLYQEIVTIRPEWHSDDLMAGKIKVVMTGASSDPAEWQKFIGKK ASRETLAKRMKDKNDELKLVIVRDMWLTGFDVPSMHTMYIDKPMQGHNLMQAIARVNRVFKEKQGGLIVDYIGIAENLKE ALAQYTESDKKTTGVDTEVAGQELLIRHDLIKELLHGHDYSKFFTGKPSEKMQAIVETMDYIIGLREDRKNDYIKLVTEM ARAYSLCATTDIAESLNVEVGFHKAVKASLVKMISNDNRKKTTTQLDSELNQLISKSISSNEVIDILSSVGLSKPNIAIL SEEFLEEVKGMKQKNLAVELLNRLLKGGIKTFSRRNLVQSKKFSELLDAAIRKYQNRAIETTQVIMELIELAKQISEAEK RGESTGLTPDELAFYDALADNDSAREIMGDEILKQIARDLTQSIKKNISVDWAIRESVQAKMKMTIKRLLKKYGYPPDKT AKAVDIVMEQTKLMCQNESR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 54 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 54 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 54 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 47 |
