Gene Information

Name : Desdi_2961 (Desdi_2961)
Accession : YP_007221764.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 2.8.1.5
Position : 3007138 - 3007710 bp
Length : 573 bp
Strand : -
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
ATGATTAACTTGGCTAAGCATTACGGTATGGTCATAGAAATCGCAAAGTGTATTGGATGTCAGGCCTGTACGGTAGCCTG
CAAATTTCAAAATAACGTTCCGGACGGACAATATAGAACCATGTCTCCGGCCTTTGGTCCTACTGGAACCTATCCGAATG
TCACCATGCATTTCGGTAAAGAAGCGTGTCAGATGTGCCAAAATGCCCCTTGTGTCGATGTTTGTCCTACAAAAGCATCA
CATTACGATGAGAATGGACTTGTGATGATTGATCCGAATAAGTGTGTTGGATGTAAATATTGCCTAACGGCTTGTCCTTA
TGATGCACGTTTTATCAACGCAGATACGGGTGCGGCAGATAAATGTACGTTTTGTTTTGAAGAAAGGGTATCTCAGGGGC
TTAAACCAGCATGTGTTACGACCTGTGTGGGAGGGTCATTAAGCTTTGGTGATGTCAATGATCCAGAGAGTGATGTGGCA
AAAATTATGGCAAAGAGTAAGGTGGAGTTCCGCAAGGGAGAACTTGGAACACAGCCTAGTATTTATTATATTTATGATGG
GGTGGTGAGATAA

Protein sequence : 
MINLAKHYGMVIEIAKCIGCQACTVACKFQNNVPDGQYRTMSPAFGPTGTYPNVTMHFGKEACQMCQNAPCVDVCPTKAS
HYDENGLVMIDPNKCVGCKYCLTACPYDARFINADTGAADKCTFCFEERVSQGLKPACVTTCVGGSLSFGDVNDPESDVA
KIMAKSKVEFRKGELGTQPSIYYIYDGVVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-38 44
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-38 44
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-38 44
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-38 44
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_2961 YP_007221764.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 4e-39 44