Gene Information

Name : Desdi_2794 (Desdi_2794)
Accession : YP_007221602.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2843297 - 2843980 bp
Length : 684 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCCGTTATTTTGGTCGTTGATGATGATGAACTAATTCAAGAGTTGCTCAAATTTAATCTGGAGAAGGAGGGCTATCA
GGTACTGATGGCTTCCGACGGCCCTGAGGCGTTAAGAGTTATAAAGGAAAAACTTCCCGATCTTGTGGTGTTAGATATTA
TGTTGCCTGGTATGAGCGGTCTTGAAGTATGCAATCAACTGCGCAGGGTGCCAAAGCTTGCTGATTTACCGGTCATTATG
CTTACCGCCAAGGGCGAGGAGATCGATAAGGTACTTGGATTGGAGATTGGGGCTGATGACTATATTACGAAGCCCTTTAG
TCCCCGAGAGCTGGTGGCAAGAATTCGGGCAAGGCTGCGACGCAATAAGCCAAGCGAAGAGGGAGCAGATATAGTACGTC
AGGATTTGCGTATTGACCTTGAACGTTTCCGAGTGTCTGTACGAGGGGAATACATAGAACTGACCCCGAAGGAATTTGAG
CTTTTACGTGTACTAGCCACTCATCCGGGTAAAGTATATACCCGGGATGAACTTCTCGAACGAATTTGGGGCTATGAATA
TGCGGGAGATACTCGAACGGTGGACGTTCATGTGAGACATCTCCGCCAAAAAATTGAGAAGGACCCATCCGATCCCGATT
ATATCGAAACACTGCGGGGTATAGGATATCGGCTGAAAGGTTAG

Protein sequence :
MAVILVVDDDELIQELLKFNLEKEGYQVLMASDGPEALRVIKEKLPDLVVLDIMLPGMSGLEVCNQLRRVPKLADLPVIM
LTAKGEEIDKVLGLEIGADDYITKPFSPRELVARIRARLRRNKPSEEGADIVRQDLRIDLERFRVSVRGEYIELTPKEFE
LLRVLATHPGKVYTRDELLERIWGYEYAGDTRTVDVHVRHLRQKIEKDPSDPDYIETLRGIGYRLKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-41 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-40 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-45 53
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 5e-55 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 2e-53 52
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-52 51
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 8e-50 50
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 3e-49 48
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 3e-44 46
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 2e-43 45
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 1e-39 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 1e-41 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 1e-42 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 1e-42 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 1e-41 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 6e-42 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 1e-42 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 5e-43 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 4e-33 43
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 2e-41 43
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 2e-41 43
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 4e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-34 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 2e-28 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 2e-29 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 6e-32 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 2e-28 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 3e-38 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 1e-39 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 7e-33 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-31 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 3e-29 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 3e-29 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 7e-38 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 5e-26 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_008702.1.4607594. Protein 8e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-38 44
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 7e-42 43
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 4e-35 43
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 6e-41 42
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 5e-33 41
Desdi_2794 YP_007221602.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-35 41