Gene Information

Name : Desdi_2628 (Desdi_2628)
Accession : YP_007221440.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2670533 - 2671225 bp
Length : 693 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAATCCGATATTAGTAATCGATGACGAAGATCGTATTCGCCATTTAGTGCGTATGTACCTCGAAAGAGAAGGATATAG
CGTTGATGAGGCTGACAACGGCCGAGAGGCTCTAGAGAAAATTCAAAAAAAGGAGTATGCCTTGCTCATTATTGATCTCA
TGATGCCCGAAGTCGACGGTTGGAAAGTATGCCGAGATGTTCGGGAGAAATCCGATATCCCCATCATTATGTTGACAGCA
CGTGGGGAAGAGTTTGACCGGGTTTTGGGATTTGAATTAGGCGCAGATGATTACCTGGTCAAGCCCTTTAGTACTAAAGA
GCTTGTAGCGCGAGTTAAAGCCCTTTTGAGGCGTTCCGGAGGGAATTTAACAGCAAATTCTTCTGATTTAGCCTATGGAC
CTTTGAAGATTGAGAAAGATAAGCATCGTGTATCCGTCGATGAAGAACAAATCACGTTTACTCCTCGGGAATTTGAACTA
CTTTACTTTCTAGCCAAAAATCCCAGCCGCGTATTTTCCAGAGAACAGCTTATGGAGACAGTATGGGGATATGATTTCTA
CGGTGATGCTCGAACGGTGGATACCCATGTTAAGAAAATCCGTGAAAAACTAGCCGATCCTAAGATAAGAAGCATGCTTG
CCACAGTGTGGGGTGTAGGTTATAAATTTGACCCCGAAGCAATTAATGGATAG

Protein sequence :
MNPILVIDDEDRIRHLVRMYLEREGYSVDEADNGREALEKIQKKEYALLIIDLMMPEVDGWKVCRDVREKSDIPIIMLTA
RGEEFDRVLGFELGADDYLVKPFSTKELVARVKALLRRSGGNLTANSSDLAYGPLKIEKDKHRVSVDEEQITFTPREFEL
LYFLAKNPSRVFSREQLMETVWGYDFYGDARTVDTHVKKIREKLADPKIRSMLATVWGVGYKFDPEAING

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-40 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-47 48
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 1e-47 47
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 1e-46 44
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 7e-48 44
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-45 44
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 1e-45 43
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 1e-38 43
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 4e-34 42
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 6e-41 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 5e-40 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 6e-41 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 5e-44 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 2e-30 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 2e-30 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 2e-30 41
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 8e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 9e-35 44
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 1e-40 42
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 5e-40 42
Desdi_2628 YP_007221440.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-37 41