|
Name : Desdi_1935 (Desdi_1935) Accession : YP_007220779.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1967165 - 1969765 bp Length : 2601 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB DNA sequence : ATGTCTTTTGATACCAATCGCTTTACGCAAAAATCTCAAGAAGCTATCATACAAGCTCAAACTATGGCGGAGCGGAATGG CAACGGTCAAGTAGAGCCTGAACATTTACTCTTGGCTCTTCTTGAACAGGGAGAGGGAGTGGTCCCTCAAGTTTTAACAA AACTAAACATCCCCGTGGGAGTATTGGCTCAAAAAGTACGTCAGGATATACAACGATTTCCGCGGATGACGGGAACCTCC GTCCAATTGACCATTTCATCGCGCCTGCGAACTGTTCTGGTCTCCGCTCACGATGAAATGGAGACGTTTAAAGATGAATA TGTTAGCACAGAGCATCTTCTCTTGGCTATCCTTGAAAAAGGGGAAGGAGGAGCCGAGAAGCTTTTAAAGCAAGAGGGAC TCAATCGCGAGAAGCTCCTGCAAGTTCTGCGGGAGATCCGAGGAACTCAACGCGTTACCAGCCAGACGCCTGAAGGAACC TTTCAGGCCCTCGAACAATACGGTCGTAATCTAGTGGAGCAAGCGCGTCGAGGAAAATTAGACCCTGTTATTGGACGGGA TGAAGAAATCCGGCGGGTGATTCAGATACTTTCACGACGAACCAAAAATAACCCTGTTCTTATTGGAGAACCTGGGGTTG GAAAAACTGCGATTGTGGAAGGTTTGTCCCAACGCATTGTTAGAGGAGACGTTCCCGAATCGGTTAAGGATAAGAAGGTA ATCAACTTAGATATGGGATTGCTTATCGCCGGAGCCAAATATCGGGGTGAATTTGAAGAACGACTCAAAGCAGTTCTCAA GGAAGTCCAAGAGCGCGAAGATATTATCCTGTTCATCGATGAGCTTCATACGGTCGTCGGGGCCGGTGCGGCTGAGGGGG CAATGGATGCCAGCAACATGCTCAAGCCCATGTTAGCTCGGGGGGAGCTACATATGGTTGGTGCCACAACCTTAGAAGAA TATCGCAAGTATATTGAAAAAGATGCAGCATTAGAACGGCGTTTCCAACCGGTTATGGTGGGAGCCCCCAGTGTCGAGGA TACCATCTCTATATTGCGCGGTCTCAAAGAACGTTATGAAACTCACCATGGGGTAAGGATAACTGATGGTGCCATCATTT CAGCGGCTATTCTTTCTGATCGGTATATCAGTGATCGATTTTTACCCGATAAGGCTATTGACCTTGTGGATGAAGCTGCG GCTCGGTTGCGGATGGAAATCACCAGTGATCCCTATGAATTAGATCAAATCAAACGCCGTGTTCTACAGCTAGAAATTGA GCGTGAGGCTTTAAAGAAGGAAAAGGACGATGGGAGTAAGGATCGTCTTGCTAAAATTGAAGAAGATTTAGCGAATCTCA AAGAAGAAAGAGGTGCCTTAGAGGCCCAACTTCAAGGGGAAAGGGAAGTTCTCACGAATATCAATAAATTAAAAGAAGAA ATTGATCAAACTCGCACAAAAATGGAGCAAGCTCAACAAACCTATGATTATAATAAAGCCGCTGAACTTCAATACGGTAT ATTACCTAAATTGGAGAAGGATTTGAATACCCTAGAAGAGCAGCTACAAACACGCAAAAATACTTTATTAAAGCAAGAAG TTGGGGAAGAGGATATCGCAGAGGTGGTTGCCAAATGGACACAAGTTCCTGTAACTAAGCTCCTCGAAAGTGAAATGGAT AAACTGGTTCATATGGAAGAGAGGATACATGAGCGTGTCATCGGTCAGGAGGAGGCCGTCAAAGCTGTAGCTGACGCTGT ACGCAGAGCTCGTGCCGGACTTCAAGATCCCAATCGTCCTTTAGGCTCCTTCTTATTCCTAGGGCCAACTGGGGTAGGGA AGACCGAGTTGGCCAAGGCTCTCGCCGAATTTCTCTTTGATGATGATCAAGGAATTGTCCGGATTGATATGTCGGAATAC ATGGAGAAACATACGGTAGCTCGATTAATTGGAGCTCCTCCTGGCTATGTGGGTTACGAGGAAGGAGGTCAGTTAACCGA AGCGGTAAGACGGAAGCCCTACAGTGTAGTACTATTCGATGAAGTTGAAAAGGCACACGGTGATGTATTTAATGTGCTTC TCCAACTGCTTGATGATGGTCGCTTAACCGATGGACAAGGACGTGTTGTCAACTTCAAAAATACCGTGGTCATTTTGACG AGCAATATTGCCAGCCCGTTGATACAAGAAATGACTGCTTCAGGCGCCTCCCAAGAAGTGTTGCGTTCCAAAGTTTCCGA AGAATTAAAACACTTTTTCCGTCCAGAATTTTTAAATAGATTGGATGAGATGATCGTGTTTCATCCTCTTGGTCAGGAGC ATATTCGTTCTATCGTTCAAATTCAATTAGATCTGCTACGTAAGTATCTGGCTCCACGAAAAATTACCCTGAATCTTTCC GATGCTGCACAGAACATCATTGTTCAACAGGGGTATGATCCAATCTATGGGGCTAGGCCACTCAAGCGTGTTATTCAGCA TAATTTACAAAATCCACTGGCGATGCGAATCCTTCAGGGAACAATTCACGAAGGTGCTCACGTCATGGTTGATGTTAACT CTCGAGGAGAATTAGATTTTAACACCCAATACAGTCTATAG Protein sequence : MSFDTNRFTQKSQEAIIQAQTMAERNGNGQVEPEHLLLALLEQGEGVVPQVLTKLNIPVGVLAQKVRQDIQRFPRMTGTS VQLTISSRLRTVLVSAHDEMETFKDEYVSTEHLLLAILEKGEGGAEKLLKQEGLNREKLLQVLREIRGTQRVTSQTPEGT FQALEQYGRNLVEQARRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLSQRIVRGDVPESVKDKKV INLDMGLLIAGAKYRGEFEERLKAVLKEVQEREDIILFIDELHTVVGAGAAEGAMDASNMLKPMLARGELHMVGATTLEE YRKYIEKDAALERRFQPVMVGAPSVEDTISILRGLKERYETHHGVRITDGAIISAAILSDRYISDRFLPDKAIDLVDEAA ARLRMEITSDPYELDQIKRRVLQLEIEREALKKEKDDGSKDRLAKIEEDLANLKEERGALEAQLQGEREVLTNINKLKEE IDQTRTKMEQAQQTYDYNKAAELQYGILPKLEKDLNTLEEQLQTRKNTLLKQEVGEEDIAEVVAKWTQVPVTKLLESEMD KLVHMEERIHERVIGQEEAVKAVADAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEY MEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILT SNIASPLIQEMTASGASQEVLRSKVSEELKHFFRPEFLNRLDEMIVFHPLGQEHIRSIVQIQLDLLRKYLAPRKITLNLS DAAQNIIVQQGYDPIYGARPLKRVIQHNLQNPLAMRILQGTIHEGAHVMVDVNSRGELDFNTQYSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-106 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-106 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desdi_1935 | YP_007220779.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 1e-120 | 41 |
| Desdi_1935 | YP_007220779.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 4e-110 | 41 |
