Gene Information

Name : Desdi_1474 (Desdi_1474)
Accession : YP_007220365.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Resistance
Product : D-Ala-D-Ala dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1501003 - 1501611 bp
Length : 609 bp
Strand : +
Note : PFAM: D-ala-D-ala dipeptidase

DNA sequence :
ATGAACAATGGTTTTGCCTATGTCGACGAGTTTGTATCCGGAATACGTTGGGATGCAAAATACGCCACTTGGGATAACTT
CACCGGCAAGCCGGTGGACGGGTATGAAGCTAACCGAATTGTCGGTACGAGAGCATTGTGCGCGGCCCTGAAAATAGCAC
GGAAAAACGCCGCATCCTTGGGCTTTGGCCTGCTCCTTTGGGATGGTTATCGCCCGCAATGTGCCGTAGATAGTTTTCTG
CGCTGGTCAAAACAGCCGGAAGATGGCCGGATGAAGCGAAAACACTATCCCAATATTCACAGAGCCGAGATAGTTGAAAA
AGGATATGTGGCCGCCAAGTCGGGACATAGTCGGGGTAGCACAATAGATTTGACGCTTTATCACTTAGCTGACGGTTCAC
TTGTGCCAATGGGCGGTGACTTTGATTTGATGGATTCTGTCTCACATCATGGAGCAAAAGGAGTTACGGAAGTCGAAACG
AGAAACCGTCAATTCCTGTGTTCGATCATGGAGACAGGTGGTTTTGTTCCCTACGATTGCGAGTGGTGGCATTACACCCT
GAAACACGAACCTTATCCCAACACATATTTTGACTTTCCCATCACCTAG

Protein sequence :
MNNGFAYVDEFVSGIRWDAKYATWDNFTGKPVDGYEANRIVGTRALCAALKIARKNAASLGFGLLLWDGYRPQCAVDSFL
RWSKQPEDGRMKRKHYPNIHRAEIVEKGYVAAKSGHSRGSTIDLTLYHLADGSLVPMGGDFDLMDSVSHHGAKGVTEVET
RNRQFLCSIMETGGFVPYDCEWWHYTLKHEPYPNTYFDFPIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-64 65
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 7e-64 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase U82965.2.orf32.gene. Protein 2e-72 76
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase AF155139.2.orf6.gene Protein 2e-67 67
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase AF130997.1.orf5.gene Protein 3e-65 65
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase AE016830.1.gene2249. Protein 7e-65 65
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase U35369.1.gene7.p01 Protein 1e-64 65
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase AF310956.2.orf6.gene Protein 2e-64 64
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase FJ349556.1.orf5.gene Protein 2e-62 63
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase M97297.gene.p01 Protein 2e-61 62
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase NC_014475.1.orf4.gen Protein 2e-61 62
Desdi_1474 YP_007220365.1 D-Ala-D-Ala dipeptidase NC_005054.2598281.p0 Protein 2e-61 62