|
Name : Desdi_1399 (Desdi_1399) Accession : YP_007220298.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Unknown Product : site-specific recombinase, DNA invertase Pin Function : - COG functional category : - COG ID : - EC number : - Position : 1422305 - 1423960 bp Length : 1656 bp Strand : + Note : PFAM: Recombinase; Resolvase, N terminal domain DNA sequence : ATGCAGACAGCGACAGCTAAAAAGAAAAGCATATCTATTATACCCTCCAAGCCGGAGTATGACAGGAATATAAAGCCTCA GTTTAAAGCCCTGCGGGTTGCGGCATACTGCCGCGTCAGCACCACGCTGGAGCAACAGGAAACCAGCTATGAAGCCCAGG TATCCTACTATACCGAAAAAATCAAGAGTAATCCCAACTGGAAGCTTGCAGGTATCTACGCCGATGACGGGAAGAGCGCT ACAAACACCAAAAAGCGTGACGACTTCAACGCCATGATCGAGGATTGCATGGCCGGAAAAATTGACATGGTCATCACCAA GTCGGTCAGCCGCTTCGCCAGAAACACGGTAGACAGCTTGCAGAACATCCGCAAGCTCAAGGAAAAGAACGTCGCCGTCT TCTTCGAAAAAGAGGGTGTGAATACGCTGGAGGGGACCGGCGAACTGTTAATAACCATCCTGAGCAGCCAGGCGCAGGAG GAAAGCCGGAACCTGAGTGAGAACACCCGATGGGGCCTTGTCAGACGGTTTGAAAACGGCATCGTCTCGGTTAACCACAA TAAGTTTTTAGGCTACACCAAGGATAAGAACGGTGAGCTGGTCATTGTACCGGAGGAAGCGGATCTGGTCAGACGGATTT TCCGCCTTTACCTTGAAGGGAGTAGTATCATACAGATTACAAAAATTTTAGAGTCGGAAGGCATCACCACCGTCACAGGA AAGAGCCAGTGGTGTCCCGGCGTAATCGATAAAATGCTGAGCAACGAAAAATATATGGGGGATGTCCTACAGCAGAAAAC CTATACCATCGATTTTCTCACTAAAAAGCGGGTGAAGAACAAAGGCATCGTCCCCCAGTATTACATAGAGGATGACCATG AAGCCATTATCCCCAAGGAGCTTTATTATCAGGTGCAGGAGGAAAAAGCGAGGCGGGCAAGTCTTAGTAAGACTGCGGCA GCCAGACGGGCAAAGCAAGAGAAGGAGAAAAGCAAATACAGCTCCAAATTCGCTTTAAGTGACATTATGGTATGCAAGGA ATGCGGCCAGCCTTACCGCAGACAGGTATGGTCTAAATACGGTCAGAAAAGCGCTGTGTGGCGGTGTGAGAACCGCCTAA AGAACGGAACCAAGAACTGCAAGCACTCCCCTACCTTCAAAGAGGAAATTCTGCATGAAGCGATAATGACCGCCATAAAC AGCGTCGTGGAAAACCGCGGCGAGTTTGTCGGAGCCTTCCGTGAGAACGTAATCCGAGTCATCGGCAGCTACTCTACTAA AAACATGACCACCGAGTTTGATGGGCAGATCGAAAAGCTGCAGGGCGAGATGCTGGCCCTGATAGAGGAAAACGCCAAGC AAGGCTCTATCAAAGAGGATTTTGACGAGAGGTATAAGAGAATCGCAGAGCAGATCAACGACCTGAAGCAGAAAAAGCTG GAGCTGGTGCGGGAGCAGAAAATGGCGGTGAATTTTCAGCAGAGGCTCGATGATATGGACGCCTGCCTGAAGAAAACAAC CTGCGAGGTCAGGGAATTTGATAACGATCTGGTCAGGAGGCTCCTGCAGAATATCAAGGCCGTCAAGGATGATCTGATAG AGATCCAATTCAAATCCGGAATCGTGATGAACCAGCGGGTTTCATACTTTGATTAA Protein sequence : MQTATAKKKSISIIPSKPEYDRNIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSA TNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNVAVFFEKEGVNTLEGTGELLITILSSQAQE ESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVPEEADLVRRIFRLYLEGSSIIQITKILESEGITTVTG KSQWCPGVIDKMLSNEKYMGDVLQQKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLSKTAA ARRAKQEKEKSKYSSKFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSPTFKEEILHEAIMTAIN SVVENRGEFVGAFRENVIRVIGSYSTKNMTTEFDGQIEKLQGEMLALIEENAKQGSIKEDFDERYKRIAEQINDLKQKKL ELVREQKMAVNFQQRLDDMDACLKKTTCEVREFDNDLVRRLLQNIKAVKDDLIEIQFKSGIVMNQRVSYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-119 | 49 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 6e-112 | 48 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 6e-112 | 48 |
