Gene Information

Name : Desdi_1399 (Desdi_1399)
Accession : YP_007220298.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1422305 - 1423960 bp
Length : 1656 bp
Strand : +
Note : PFAM: Recombinase; Resolvase, N terminal domain

DNA sequence :
ATGCAGACAGCGACAGCTAAAAAGAAAAGCATATCTATTATACCCTCCAAGCCGGAGTATGACAGGAATATAAAGCCTCA
GTTTAAAGCCCTGCGGGTTGCGGCATACTGCCGCGTCAGCACCACGCTGGAGCAACAGGAAACCAGCTATGAAGCCCAGG
TATCCTACTATACCGAAAAAATCAAGAGTAATCCCAACTGGAAGCTTGCAGGTATCTACGCCGATGACGGGAAGAGCGCT
ACAAACACCAAAAAGCGTGACGACTTCAACGCCATGATCGAGGATTGCATGGCCGGAAAAATTGACATGGTCATCACCAA
GTCGGTCAGCCGCTTCGCCAGAAACACGGTAGACAGCTTGCAGAACATCCGCAAGCTCAAGGAAAAGAACGTCGCCGTCT
TCTTCGAAAAAGAGGGTGTGAATACGCTGGAGGGGACCGGCGAACTGTTAATAACCATCCTGAGCAGCCAGGCGCAGGAG
GAAAGCCGGAACCTGAGTGAGAACACCCGATGGGGCCTTGTCAGACGGTTTGAAAACGGCATCGTCTCGGTTAACCACAA
TAAGTTTTTAGGCTACACCAAGGATAAGAACGGTGAGCTGGTCATTGTACCGGAGGAAGCGGATCTGGTCAGACGGATTT
TCCGCCTTTACCTTGAAGGGAGTAGTATCATACAGATTACAAAAATTTTAGAGTCGGAAGGCATCACCACCGTCACAGGA
AAGAGCCAGTGGTGTCCCGGCGTAATCGATAAAATGCTGAGCAACGAAAAATATATGGGGGATGTCCTACAGCAGAAAAC
CTATACCATCGATTTTCTCACTAAAAAGCGGGTGAAGAACAAAGGCATCGTCCCCCAGTATTACATAGAGGATGACCATG
AAGCCATTATCCCCAAGGAGCTTTATTATCAGGTGCAGGAGGAAAAAGCGAGGCGGGCAAGTCTTAGTAAGACTGCGGCA
GCCAGACGGGCAAAGCAAGAGAAGGAGAAAAGCAAATACAGCTCCAAATTCGCTTTAAGTGACATTATGGTATGCAAGGA
ATGCGGCCAGCCTTACCGCAGACAGGTATGGTCTAAATACGGTCAGAAAAGCGCTGTGTGGCGGTGTGAGAACCGCCTAA
AGAACGGAACCAAGAACTGCAAGCACTCCCCTACCTTCAAAGAGGAAATTCTGCATGAAGCGATAATGACCGCCATAAAC
AGCGTCGTGGAAAACCGCGGCGAGTTTGTCGGAGCCTTCCGTGAGAACGTAATCCGAGTCATCGGCAGCTACTCTACTAA
AAACATGACCACCGAGTTTGATGGGCAGATCGAAAAGCTGCAGGGCGAGATGCTGGCCCTGATAGAGGAAAACGCCAAGC
AAGGCTCTATCAAAGAGGATTTTGACGAGAGGTATAAGAGAATCGCAGAGCAGATCAACGACCTGAAGCAGAAAAAGCTG
GAGCTGGTGCGGGAGCAGAAAATGGCGGTGAATTTTCAGCAGAGGCTCGATGATATGGACGCCTGCCTGAAGAAAACAAC
CTGCGAGGTCAGGGAATTTGATAACGATCTGGTCAGGAGGCTCCTGCAGAATATCAAGGCCGTCAAGGATGATCTGATAG
AGATCCAATTCAAATCCGGAATCGTGATGAACCAGCGGGTTTCATACTTTGATTAA

Protein sequence :
MQTATAKKKSISIIPSKPEYDRNIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSA
TNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNVAVFFEKEGVNTLEGTGELLITILSSQAQE
ESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVPEEADLVRRIFRLYLEGSSIIQITKILESEGITTVTG
KSQWCPGVIDKMLSNEKYMGDVLQQKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLSKTAA
ARRAKQEKEKSKYSSKFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSPTFKEEILHEAIMTAIN
SVVENRGEFVGAFRENVIRVIGSYSTKNMTTEFDGQIEKLQGEMLALIEENAKQGSIKEDFDERYKRIAEQINDLKQKKL
ELVREQKMAVNFQQRLDDMDACLKKTTCEVREFDNDLVRRLLQNIKAVKDDLIEIQFKSGIVMNQRVSYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 6e-119 49
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 6e-112 48
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 6e-112 48