Gene Information

Name : Desdi_1368 (Desdi_1368)
Accession : YP_007220270.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399442 - 1400125 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAGAATTTTAGTCGTCGATGATGATGAGCGAATCCGAGAGATTGTCCGCCTCTATCTGGAAGCGGAAGGCTATGACAT
TGAAGAAGCGGACAATGGGAATAGTGCTTTGGAGAAGGTTCGCAAGGACTCCTTCGATCTCGTTATTCTCGATTTGATGA
TGCCGGGTCTCGATGGGTGGACGGTCTGCAAAGTCTTACGGAAAGAAACTCAAATTCCGATTATTATGTTGACCGCTAAA
GGGGAGGAAAATGATCGGGTCCTAGGGTTTGATTTAGGAGCGGATGATTATGTCGTCAAACCCTTTAGTCCAAGAGAATT
GAGCGCTCGGGTCAAGGCTGTTCTCCGTCGACTGGAAGGGGAACAGACCAAAGAGCATTTAATTTCCTACCCGGATTTTA
CCATCAATCAAATTACCCGCGAAGTGATTGTGGAGGGGACAGAGGTTAAGCTCACAACAAAAGAGTTTGATCTCCTGTTA
GTTTTAGCCAAGAAGCCAAACCGGATCTTTACGCGCGATCAATTGCTGAACACGGTCTGGGAGTATGATTATTGCGGAGA
TTCAAGAACGGTTGATACGCATATCAATCGTTTACGTTCAAAATTTGAGAGTCAAGTTGGGTTTAGCGACTTTATTCAAA
CCGTTAGAGGAGTGGGGTACAAATTCGAATGGAGTGGTCATTAA

Protein sequence :
MRILVVDDDERIREIVRLYLEAEGYDIEEADNGNSALEKVRKDSFDLVILDLMMPGLDGWTVCKVLRKETQIPIIMLTAK
GEENDRVLGFDLGADDYVVKPFSPRELSARVKAVLRRLEGEQTKEHLISYPDFTINQITREVIVEGTEVKLTTKEFDLLL
VLAKKPNRIFTRDQLLNTVWEYDYCGDSRTVDTHINRLRSKFESQVGFSDFIQTVRGVGYKFEWSGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-41 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-41 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 6e-45 48
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 9e-47 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-46 47
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-44 46
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 1e-44 45
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 5e-46 45
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 8e-44 43
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 8e-40 41
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 8e-38 41
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 7e-38 41
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 8e-38 41
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 8e-38 41
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 8e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 2e-41 44
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 7e-42 44
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 5e-40 43
Desdi_1368 YP_007220270.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 9e-33 41