|
Name : Desdi_1292 (Desdi_1292) Accession : YP_007220199.1 Strain : Desulfitobacterium dichloroeliminans LMG P-21439 Genome accession: NC_019903 Putative virulence/resistance : Unknown Product : site-specific recombinase, DNA invertase Pin Function : - COG functional category : - COG ID : - EC number : - Position : 1331032 - 1332594 bp Length : 1563 bp Strand : + Note : PFAM: Recombinase; Resolvase, N terminal domain DNA sequence : GTGGCCGAGAAAAACATAACTGTAATTCCAGCACGAAAAAGGGTGGGAAGTACAGCCGCAAAAGAAAAGGTAAAAAAACT TCGTGTAGCTGCTTATTGCCGTGTTTCTACAGAAACTGAAGAGCAGAACTCAAGCTATGAGGTGCAGGTTGCTCACTACA CTGAGTTTATAAAGAAAAATGCTGAATGGGAGTTTGCAGGCATATTTGCAGATGACGGCATTTCAGGCACTAACACGAAA AAACGAGAAGAGTTCAATCGCATGATTGACGGGTGCATGGAGGGGAACATCGATCTGGTGATTACAAAGTCCATTAGTCG ATTTGCCAGGAATACTCTGGATTGCCTAAAATATATTAGGCAGCTCAAGGATAAGAACATATCCGTATTTTTTGAGAAAG AGAACATCAACACAATGGATGCCAAGGGAGAGGTGCTTCTGACCATTATGGCATCCCTCGCGCAGCAAGAAAGTCAGAGC CTTTCACAGAATGTTAAGCTGGGACTTCAGTATCGATACCAGCAGGGCAAAGTTCAGGTCAACCACAATCGATTTATGGG GTACACGAAAGATGATGAAGGCAACCTAATCATTGTTCCTGAAGAGGCTGAAATCATTAAGCGCATATACAGAGAGTACC TTGAGGGTAAAAGCCTAGCAGGCATTGGGAGGGATCTTGAGAAGGATGATATTTTAACAGCTGCAGGAAAACCAAGATGG CGACCGGAGACCATAAAAAAGATTCTGATGAACGAAAAATACATCGGGGATGCCCTTTTACAGAAGACCTTCACTGTGGA TTTTCTTACGAAGAAAAGAGTCAAGAATGAAGGCCATGTCCCACAGTATTATGTTGAAAATAGCCATGAGGCGATCATAC CAAAGGAACTATTTTTACAGGCTCAGGAAGAACTTCATCGCAGGAATAATATTTATACAGGGGCAGATAAAAACAAAAGA CTCTATAGCAGTAAATACGCTTTGAGCACCATAACCTTCTGCGGAGATTGCGGGGACATTTACAGACGGGTCTACTGGAA TATACGCGGTAGAAAAGAGTTCGTATGGCGATGCGTTACGAGAATCGAGCAAGGTCCTGAAACGTGTAAGAACCGCACGG TAAAAGAAGGAGATTTATATGACGCGGTAATGACGGCCATTAACAAGCTCCTTGCCGGTGGAGATAACATGATGAGAACA CTGGAAGAAAACATCCATGCAATAATTGGTGACACCACAGAGTACAGAATATCAGAGATAAACACCTTACTTGAAGAAAA ACAGAAAGAAATAATCAGCCTGGCTAATAACGGAAAAGACTTTGAATTCCTTTCAGAAGAGGTTGATAAGCTCCGTGAAG AGCGGCAGAGGCTTCTTGTGGAAGATGCATCCTTAAGTGGAGAGAATGAGCGAATCAACGAGCTGATAGGATTTATCTGC AGGAACAAATATCGCACCCTACTGTATGATGACACTTTAGTAAGGAAGCTGATCCAAAACGTCACTGTGTACGAAGACCA CTTTGTAATAAGCTTTAAGTCTGGCATTGAAATTGAAGTATGA Protein sequence : MAEKNITVIPARKRVGSTAAKEKVKKLRVAAYCRVSTETEEQNSSYEVQVAHYTEFIKKNAEWEFAGIFADDGISGTNTK KREEFNRMIDGCMEGNIDLVITKSISRFARNTLDCLKYIRQLKDKNISVFFEKENINTMDAKGEVLLTIMASLAQQESQS LSQNVKLGLQYRYQQGKVQVNHNRFMGYTKDDEGNLIIVPEEAEIIKRIYREYLEGKSLAGIGRDLEKDDILTAAGKPRW RPETIKKILMNEKYIGDALLQKTFTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEELHRRNNIYTGADKNKR LYSSKYALSTITFCGDCGDIYRRVYWNIRGRKEFVWRCVTRIEQGPETCKNRTVKEGDLYDAVMTAINKLLAGGDNMMRT LEENIHAIIGDTTEYRISEINTLLEEKQKEIISLANNGKDFEFLSEEVDKLREERQRLLVEDASLSGENERINELIGFIC RNKYRTLLYDDTLVRKLIQNVTVYEDHFVISFKSGIEIEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 0.0 | 87 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 0.0 | 87 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-159 | 64 |
